RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GUCY1B3Q02153 619 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 ZNF484Q5JVG2 852 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 FBXO47Q5MNV8 452 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 TSHZ1Q6ZSZ6 1077 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 TBC1D32Q96NH3 1257 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 UNC45AQ9H3U1 944 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 MYO9BQ13459 2157 aa17.35■□□□□ 0.37
VARS-219ENST00000461328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
VARS-219ENST00000461328 LINC01553A4QN01 128 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 ATP4AP20648 1035 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 GNL2Q13823 731 aaKnown RBP17.34■□□□□ 0.37
VARS-219ENST00000461328 SPRED2Q7Z698 418 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 NME8Q8N427 588 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
VARS-219ENST00000461328 TOP1MTQ969P6 601 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 FAM167AQ96KS9 214 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 TGS1Q96RS0 853 aaKnown RBP17.34■□□□□ 0.37
VARS-219ENST00000461328 YME1L1Q96TA2 773 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 MTUS1Q9ULD2 1270 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 IGSF9BQ9UPX0 1349 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
VARS-219ENST00000461328 SIP14410 1827 aa17.33■□□□□ 0.37
VARS-219ENST00000461328 BTBD18B2RXH4 712 aa17.33■□□□□ 0.36
VARS-219ENST00000461328 PSMD10O75832 226 aa17.33■□□□□ 0.36
VARS-219ENST00000461328 HTRA4P83105 476 aaPredicted RBP17.33■□□□□ 0.36
VARS-219ENST00000461328 EARS2Q5JPH6 523 aaKnown RBP17.33■□□□□ 0.36
VARS-219ENST00000461328 PPP4R3AQ6IN85 833 aa17.33■□□□□ 0.36
VARS-219ENST00000461328 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
VARS-219ENST00000461328 CEP131Q9UPN4 1083 aa17.33■□□□□ 0.36
VARS-219ENST00000461328 SQORQ9Y6N5 450 aa17.33■□□□□ 0.36
VARS-219ENST00000461328 CD52P31358 61 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 ERVK-21P61565 698 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 PRKCEQ02156 737 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 GRB10Q13322 594 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 RDM1Q8NG50 284 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 TNFRSF25Q93038 417 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
VARS-219ENST00000461328 PRDM6Q9NQX0 595 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 GINS2Q9Y248 185 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 MTCH2Q9Y6C9 303 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 PRUNE2Q8WUY3 3088 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 A0A0C4DFX4 3053 aa17.32■□□□□ 0.36
VARS-219ENST00000461328 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
VARS-219ENST00000461328 OATP04181 439 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 POU3F3P20264 500 aaPredicted RBP17.31■□□□□ 0.36
VARS-219ENST00000461328 PAK2Q13177 524 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 SP7Q8TDD2 431 aaPredicted RBP17.31■□□□□ 0.36
VARS-219ENST00000461328 GDPD5Q8WTR4 605 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 FAM20AQ96MK3 541 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
VARS-219ENST00000461328 THEGQ9P2T0 379 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 KIF3AQ9Y496 699 aa17.31■□□□□ 0.36
VARS-219ENST00000461328 COL4A4P53420 1690 aaPredicted RBP17.3■□□□□ 0.36
VARS-219ENST00000461328 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 ENPP3O14638 875 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 C22orf31O95567 290 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 ATP2B1P20020 1258 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 MCM2P49736 904 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
VARS-219ENST00000461328 UGCGQ16739 394 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 KIAA0319LQ8IZA0 1049 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 C17orf80Q9BSJ5 609 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 NRBP2Q9NSY0 501 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 SEPT9Q9UHD8 586 aaPredicted RBP17.3■□□□□ 0.36
VARS-219ENST00000461328 PADI3Q9ULW8 664 aa17.3■□□□□ 0.36
VARS-219ENST00000461328 MYH9P35579 1960 aaKnown RBP17.29■□□□□ 0.36
VARS-219ENST00000461328 TBX3O15119 743 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 MAGEB2O15479 319 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 ZNF862O60290 1169 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 NEMFO60524 1076 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 LPXNO60711 386 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 CALCRLQ16602 461 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 BANK1Q8NDB2 785 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 FBXO22Q8NEZ5 403 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 PPP1R16BQ96T49 567 aa17.29■□□□□ 0.36
VARS-219ENST00000461328 COL25A1Q9BXS0 654 aaPredicted RBP17.29■□□□□ 0.36
VARS-219ENST00000461328 TRANK1O15050 2925 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
VARS-219ENST00000461328 VTNP04004 478 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 TMOD1P28289 359 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
VARS-219ENST00000461328 PPP2R5CQ13362 524 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 TMEM266Q2M3C6 531 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 LINC01599Q8WXQ3 324 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms