RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ITGB1P05556 798 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 ITGB5P18084 799 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SREBF1P36956 1147 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 LPIN1Q14693 890 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 TSHZ1Q6ZSZ6 1077 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SMARCC2Q8TAQ2 1214 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SPPL3Q8TCT6 385 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SUSD6Q92537 303 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SENP7Q9BQF6 1050 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 NAP1L2Q9ULW6 460 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 PCDHA6Q9UN73 950 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 USP15Q9Y4E8 981 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 PCDHA8Q9Y5H6 950 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 UBIAD1Q9Y5Z9 338 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 PLXNA4Q9HCM2 1894 aa15.56■□□□□ 0.08
SCAMP4-206ENST00000460767 MBLAC1A4D2B0 266 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 DEXIO95424 95 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 FOSP01100 380 aaPredicted RBP15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 GHRP10912 638 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 FDPSP14324 419 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 DNAJB1P25685 340 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 ADCY7P51828 1080 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 ARHGAP4P98171 946 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 FBXO47Q5MNV8 452 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 ADGRD2Q7Z7M1 963 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 TBC1D32Q96NH3 1257 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 FTHL17Q9BXU8 183 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 IGFLR1Q9H665 355 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 MRPL42Q9Y6G3 142 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 USP34Q70CQ2 3546 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 KAT6AQ92794 2004 aa15.55■□□□□ 0.08
SCAMP4-206ENST00000460767 SORBS3O60504 671 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 PPFIA3O75145 1194 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 CYP3A4P08684 503 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 AVPR2P30518 371 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 UBE3AQ05086 875 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 STK3Q13188 491 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 RSPH3Q86UC2 560 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 TRIM50Q86XT4 487 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 DAGLBQ8NCG7 672 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 ATP8B4Q8TF62 1192 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 LINC01599Q8WXQ3 324 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 GPRASP2Q96D09 838 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 CDCA3Q99618 268 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 ANO3Q9BYT9 981 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 SLKQ9H2G2 1235 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 BCAS3Q9H6U6 928 aa15.54■□□□□ 0.08
SCAMP4-206ENST00000460767 ZDBF2Q9HCK1 2354 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 KCNA2P16389 499 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 CYFIP1Q7L576 1253 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 NSUN7Q8NE18 718 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 POF1BQ8WVV4 589 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 AIFM3Q96NN9 605 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 TMEM260Q9NX78 707 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 VPS54Q9P1Q0 977 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 C5orf42Q9H799 3197 aa15.53■□□□□ 0.08
SCAMP4-206ENST00000460767 CACNA1HO95180 2353 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 IGLV3-22A0A075B6J6 115 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 MEIS1O00470 390 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 MAFGO15525 162 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 GNA11P29992 359 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 NRIP1P48552 1158 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 MCTP2Q6DN12 878 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 TMEM184AQ6ZMB5 413 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 NECAB1Q8N987 351 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 KLHL23Q8NBE8 558 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 CCDC148Q8NFR7 591 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 CYP2W1Q8TAV3 490 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 JADE2Q9NQC1 790 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 BARX2Q9UMQ3 279 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 TRIOO75962 3097 aa15.52■□□□□ 0.08
SCAMP4-206ENST00000460767 CPLX1O14810 134 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 ATP9AO75110 1047 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 CDKL5O76039 1030 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 STAG3L1P0CL83 205 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 CIITAP33076 1130 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 NBL1P41271 181 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 KCNC3Q14003 757 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 RABEP1Q15276 862 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 GALNT17Q6IS24 598 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 PDE12Q6L8Q7 609 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 NIPA1Q7RTP0 329 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 ERMP1Q7Z2K6 904 aa15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 REXO1Q8N1G1 1221 aaKnown RBP15.51■□□□□ 0.07
SCAMP4-206ENST00000460767 RASGRP4Q8TDF6 673 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms