RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 HOXA7P31268 230 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-209ENST00000460731 TM4SF4P48230 202 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 BACE1P56817 501 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 INHBEP58166 350 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 TROAPQ12815 778 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 SLC4A8Q2Y0W8 1093 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 CYP27C1Q4G0S4 372 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 FAM47AQ5JRC9 791 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 PRRT2Q7Z6L0 340 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-209ENST00000460731 IQCA1Q86XH1 822 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 CCNJLQ8IV13 435 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 DNAJC5GQ8N7S2 189 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 LRRN4CLQ8ND94 238 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 ACER1Q8TDN7 264 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 LPAR1Q92633 364 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 LY9Q9HBG7 655 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 ZCCHC17Q9NP64 241 aaKnown RBP6.6□□□□□ -1.35
PTPN12-209ENST00000460731 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 ADAMTS5Q9UNA0 930 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 SLC45A1Q9Y2W3 748 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 ZHX2Q9Y6X8 837 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 PTPRFP10586 1907 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 MYH8P13535 1937 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
PTPN12-209ENST00000460731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 A0A096LPE4 126 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 A0A1W2PPZ6 126 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 F5H6K3 240 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 SH2B2O14492 632 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 PRC1O43663 620 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 MPSTP25325 297 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 SMARCA1P28370 1054 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 MAP2K2P36507 400 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 PRKCQQ04759 706 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 ICA1Q05084 483 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 KLRC3Q07444 240 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 SPP2Q13103 211 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 PRKG1Q13976 671 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 TOB2Q14106 344 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 PPP2R5BQ15173 497 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 RABEP1Q15276 862 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 KIAA1755Q5JYT7 1200 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 BLOC1S2Q6QNY1 142 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 BTNL9Q6UXG8 535 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 RALYLQ86SE5 291 aaKnown RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 RASAL3Q86YV0 1011 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 TTC16Q8NEE8 873 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 OPTNQ96CV9 577 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 JAKMIP1Q96N16 626 aaKnown RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 TCF12Q99081 682 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 TMEM47Q9BQJ4 181 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 VCPKMTQ9H867 229 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 UPF2Q9HAU5 1272 aaKnown RBP6.59□□□□□ -1.35
PTPN12-209ENST00000460731 ZFYVE1Q9HBF4 777 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 U3KQE9 123 aa6.59□□□□□ -1.35
PTPN12-209ENST00000460731 NID2Q14112 1375 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 TNKSO95271 1327 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 ATAD5Q96QE3 1844 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 MANSC4A6NHS7 340 aaPredicted RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 IFIT3O14879 490 aaKnown RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 CETPP11597 493 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 NPR3P17342 541 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 CASTP20810 708 aaKnown RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 ECE1P42892 770 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 GRIA4P48058 902 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF157P51786 506 aaPredicted RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 GTF2A2P52657 109 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 USP14P54578 494 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 NOGQ13253 232 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 SNAPC2Q13487 334 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 SART3Q15020 963 aaKnown RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 RAB3GAP1Q15042 981 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 RRP12Q5JTH9 1297 aaKnown RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 LBX2Q6XYB7 198 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 FASTKD5Q7L8L6 764 aaKnown RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 C1QL4Q86Z23 238 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 BRI3BPQ8WY22 251 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 PTPN18Q99952 460 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 UBAC1Q9BSL1 405 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 SH2D4AQ9H788 454 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF408Q9H9D4 720 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 ZFYVE28Q9HCC9 887 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.58□□□□□ -1.365e-9■■■■■ 64.7
PTPN12-209ENST00000460731 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.58□□□□□ -1.36
PTPN12-209ENST00000460731 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 BRPF3Q9ULD4 1205 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 PPP1R9AQ9ULJ8 1098 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 AP4E1Q9UPM8 1137 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 RLFQ13129 1914 aa6.58□□□□□ -1.36
PTPN12-209ENST00000460731 MYPNQ86TC9 1320 aa6.57□□□□□ -1.36
PTPN12-209ENST00000460731 MPHOSPH10O00566 681 aaKnown RBP6.57□□□□□ -1.36
PTPN12-209ENST00000460731 AOC2O75106 756 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms