RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MSL3Q8N5Y2 521 aaKnown RBP16.82■□□□□ 0.28
LMNB1-203ENST00000460265 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 TUBB2BQ9BVA1 445 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 RUSC1Q9BVN2 902 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 CHUKO15111 745 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 CASP4P49662 377 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 TRAF1Q13077 416 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 DGKZQ13574 1117 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
LMNB1-203ENST00000460265 NDUFAB1O14561 156 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 LRRN2O75325 713 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 GNA14O95837 355 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 GNGT1P63211 74 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 SND1Q7KZF4 910 aaKnown RBP eCLIP16.81■□□□□ 0.281e-7■■■□□ 15.1
LMNB1-203ENST00000460265 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
LMNB1-203ENST00000460265 GFPT2O94808 682 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 SYF2O95926 243 aaKnown RBP16.81■□□□□ 0.28
LMNB1-203ENST00000460265 RRP1BQ14684 758 aaKnown RBP16.81■□□□□ 0.28
LMNB1-203ENST00000460265 MS4A14Q96JA4 679 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 SH2D4AQ9H788 454 aa16.81■□□□□ 0.28
LMNB1-203ENST00000460265 YDJCA8MPS7 323 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 TMEM110-MUSTN1A8MSY1 372 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 AFPP02771 609 aaKnown RBP16.8■□□□□ 0.28
LMNB1-203ENST00000460265 NR3C1P04150 777 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 DPEP1P16444 411 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 ADAT2Q7Z6V5 191 aaKnown RBP16.8■□□□□ 0.28
LMNB1-203ENST00000460265 COG1Q8WTW3 980 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 GCNT4Q9P109 453 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 BCORQ6W2J9 1755 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 PLSCR1O15162 318 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 GGCXP38435 758 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
LMNB1-203ENST00000460265 STXBP4Q6ZWJ1 553 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 KLRG2A4D1S0 409 aaPredicted RBP16.8■□□□□ 0.28
LMNB1-203ENST00000460265 K7ENM7 598 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 CEP104O60308 925 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 ENTPD3O75355 529 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 TRIM49P0CI25 452 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 TRIM49CP0CI26 452 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 KRT13P13646 458 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 RPA1P27694 616 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 ACTN3Q08043 901 aaPredicted RBP16.8■□□□□ 0.28
LMNB1-203ENST00000460265 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 C8orf74Q6P047 294 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 FMNL3Q8IVF7 1028 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
LMNB1-203ENST00000460265 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 KCNK3O14649 394 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 ARP10275 920 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 CLNS1AP54105 237 aaKnown RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 GIT2Q14161 759 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 LLGL1Q15334 1064 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 STYK1Q6J9G0 422 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 TEKT3Q9BXF9 490 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 RASA3Q14644 834 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 CEP55Q53EZ4 464 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 PALMO75781 387 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 FAM43BQ6ZT52 329 aaPredicted RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 TACO1Q9BSH4 297 aaKnown RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 HERC5Q9UII4 1024 aaKnown RBP16.79■□□□□ 0.28
LMNB1-203ENST00000460265 HYOU1Q9Y4L1 999 aa16.79■□□□□ 0.28
LMNB1-203ENST00000460265 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 GOLGA8IPA6NC78 632 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 GOLGA8JA6NMD2 632 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 EDIL3O43854 480 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 ESYT3A0FGR9 886 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 SERPING1P05155 500 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 MCM3P25205 808 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 GUCY2FP51841 1108 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 ARSHQ5FYA8 562 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
LMNB1-203ENST00000460265 MKL1Q969V6 931 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 BICD1Q96G01 975 aa16.78■□□□□ 0.28
LMNB1-203ENST00000460265 PACSIN1Q9BY11 444 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms