RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ATP4AP20648 1035 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 USP11P51784 963 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 GRB10Q13322 594 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 LPIN1Q14693 890 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 RILPL1Q5EBL4 403 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 NIPA1Q7RTP0 329 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 CCDC60Q8IWA6 550 aaPredicted RBP17.58■□□□□ 0.4
SDF4-204ENST00000459994 TBCKQ8TEA7 893 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 LENG9Q96B70 501 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.4
SDF4-204ENST00000459994 XIRP2A4UGR9 3374 aa17.58■□□□□ 0.4
SDF4-204ENST00000459994 STAT5BP51692 787 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 INF2Q27J81 1249 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 ATL3Q6DD88 541 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 ABHD15Q6UXT9 468 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 NEK8Q86SG6 692 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 SEPT8Q92599 483 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 GJA10Q969M2 543 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 RAD9AQ99638 391 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 FAM49AQ9H0Q0 323 aaPredicted RBP17.57■□□□□ 0.4
SDF4-204ENST00000459994 TRPC6Q9Y210 931 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 CDY2AQ9Y6F7 541 aa17.57■□□□□ 0.4
SDF4-204ENST00000459994 UPP2O95045 317 aa17.56■□□□□ 0.4
SDF4-204ENST00000459994 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
SDF4-204ENST00000459994 HTRA4P83105 476 aaPredicted RBP17.56■□□□□ 0.4
SDF4-204ENST00000459994 MOXD1Q6UVY6 613 aa17.56■□□□□ 0.4
SDF4-204ENST00000459994 RPAINQ86UA6 219 aa17.56■□□□□ 0.4
SDF4-204ENST00000459994 NAP1L4Q99733 375 aaKnown RBP17.56■□□□□ 0.4
SDF4-204ENST00000459994 C17orf80Q9BSJ5 609 aa17.56■□□□□ 0.4
SDF4-204ENST00000459994 IFIH1Q9BYX4 1025 aaKnown RBP17.56■□□□□ 0.4
SDF4-204ENST00000459994 AZI2Q9H6S1 392 aa17.56■□□□□ 0.4
SDF4-204ENST00000459994 AGO3Q9H9G7 860 aaKnown RBP17.56■□□□□ 0.4
SDF4-204ENST00000459994 FNDC1Q4ZHG4 1894 aaPredicted RBP17.55■□□□□ 0.4
SDF4-204ENST00000459994 CYP3A7-CYP3A51PA0A087WV96 503 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 POTEB3A0JP26 581 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 ZBTB42B2RXF5 422 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
SDF4-204ENST00000459994 EFCAB14O75071 495 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 AMHP03971 560 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 POU3F3P20264 500 aaPredicted RBP17.55■□□□□ 0.4
SDF4-204ENST00000459994 CYP3A7P24462 503 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 CIITAP33076 1130 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
SDF4-204ENST00000459994 PRR16Q569H4 304 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 FBXO47Q5MNV8 452 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 POTEBQ6S5H4 581 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 PLPPR4Q7Z2D5 763 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 TOP1MTQ969P6 601 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
SDF4-204ENST00000459994 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 CUL9Q8IWT3 2517 aa17.55■□□□□ 0.4
SDF4-204ENST00000459994 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
SDF4-204ENST00000459994 ERVK-21P61565 698 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 MRPS6P82932 125 aaKnown RBP17.54■□□□□ 0.4
SDF4-204ENST00000459994 TFF2Q03403 129 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 SWSAP1Q6NVH7 229 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 TAF2Q6P1X5 1199 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 TRMT1LQ7Z2T5 733 aaKnown RBP17.54■□□□□ 0.4
SDF4-204ENST00000459994 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
SDF4-204ENST00000459994 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
SDF4-204ENST00000459994 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
SDF4-204ENST00000459994 PLXNA4Q9HCM2 1894 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 RRN3P2A6NIE6 340 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 BACH1O14867 736 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 MSH4O15457 936 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 CD52P31358 61 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 LETM2Q2VYF4 491 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 RTN4RL1Q86UN2 441 aaPredicted RBP17.53■□□□□ 0.4
SDF4-204ENST00000459994 TGS1Q96RS0 853 aaKnown RBP17.53■□□□□ 0.4
SDF4-204ENST00000459994 CDHR5Q9HBB8 845 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 ZNF302Q9NR11 478 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.53■□□□□ 0.4
SDF4-204ENST00000459994 THEGQ9P2T0 379 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
SDF4-204ENST00000459994 BMP15O95972 392 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 ATP2B1P20020 1258 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 KLRC1P26715 233 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
SDF4-204ENST00000459994 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 INSL6Q9Y581 213 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 PCDHB6Q9Y5E3 794 aa17.52■□□□□ 0.4
SDF4-204ENST00000459994 WNT7AO00755 349 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 ENPP3O14638 875 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 TDP2O95551 362 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 LINC00271P0C7V0 271 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 NASPP49321 788 aaPredicted RBP17.51■□□□□ 0.39
SDF4-204ENST00000459994 KRT85P78386 507 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 SETQ01105 290 aaPredicted RBP17.51■□□□□ 0.39
SDF4-204ENST00000459994 ZNF174Q15697 407 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 UGCGQ16739 394 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms