RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 NAP1L4Q99733 375 aaKnown RBP20.91■□□□□ 0.94
HOXD3-204ENST00000459979 BRMS1Q9HCU9 246 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 TRPC6Q9Y210 931 aa20.91■□□□□ 0.94
HOXD3-204ENST00000459979 WDR64B1ANS9 1081 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 HBP1O60381 514 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 GAS7O60861 476 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 CTSHP09668 335 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 ATP4AP20648 1035 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 SFNP31947 248 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 MKRN4PQ13434 485 aaPredicted RBP20.9■□□□□ 0.94
HOXD3-204ENST00000459979 LRCH2Q5VUJ6 765 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 PIK3AP1Q6ZUJ8 805 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 RDM1Q8NG50 284 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 KHSRPQ92945 711 aaKnown RBP eCLIP20.9■□□□□ 0.94
HOXD3-204ENST00000459979 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 TEKT3Q9BXF9 490 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 DDX25Q9UHL0 483 aaKnown RBP20.9■□□□□ 0.94
HOXD3-204ENST00000459979 PCDHA2Q9Y5H9 948 aa20.9■□□□□ 0.94
HOXD3-204ENST00000459979 COL1A2P08123 1366 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 ST18O60284 1047 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 AMHP03971 560 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 JAK3P52333 1124 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 HMGN5P82970 282 aaKnown RBP20.89■□□□□ 0.93
HOXD3-204ENST00000459979 NR5A1Q13285 461 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 TRIM29Q14134 588 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 LETM2Q2VYF4 491 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 PLEKHG4Q58EX7 1191 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 EARS2Q5JPH6 523 aaKnown RBP20.89■□□□□ 0.93
HOXD3-204ENST00000459979 RUFY4Q6ZNE9 571 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 RSPH3Q86UC2 560 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 BBXQ8WY36 941 aaPredicted RBP20.89■□□□□ 0.93
HOXD3-204ENST00000459979 FAM20AQ96MK3 541 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 C1QTNF1Q9BXJ1 281 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 KCNMB3Q9NPA1 279 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 DISC1Q9NRI5 854 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 LMCD1Q9NZU5 365 aa20.89■□□□□ 0.93
HOXD3-204ENST00000459979 ATG2AQ2TAZ0 1938 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 TBX3O15119 743 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 ZNF484Q5JVG2 852 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 FBXO22Q8NEZ5 403 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 INSL6Q9Y581 213 aa20.88■□□□□ 0.93
HOXD3-204ENST00000459979 SMIM35A0A1B0GVV1 85 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 BTBD18B2RXH4 712 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 SLC37A4O43826 429 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 CHRNA1P02708 482 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 IGBP1P78318 339 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 MGAT3Q09327 533 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 DIS3L2Q8IYB7 885 aaKnown RBP20.87■□□□□ 0.93
HOXD3-204ENST00000459979 UNC45AQ9H3U1 944 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 UBE2ZQ9H832 354 aaPredicted RBP20.87■□□□□ 0.93
HOXD3-204ENST00000459979 CD320Q9NPF0 282 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 GABBR1Q9UBS5 961 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 SAMM50Q9Y512 469 aa20.87■□□□□ 0.93
HOXD3-204ENST00000459979 ZBTB42B2RXF5 422 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 UPP2O95045 317 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 HTRA4P83105 476 aaPredicted RBP20.86■□□□□ 0.93
HOXD3-204ENST00000459979 MTHFD1LQ6UB35 978 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 NME8Q8N427 588 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 DNAJB3Q8WWF6 145 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 GJA10Q969M2 543 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 FAM167AQ96KS9 214 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 LRFN3Q9BTN0 628 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 RALGAPA2Q2PPJ7 1873 aa20.86■□□□□ 0.93
HOXD3-204ENST00000459979 EVPLQ92817 2033 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 FAM205CA6NFA0 338 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 CCNT1O60563 726 aaKnown RBP20.85■□□□□ 0.93
HOXD3-204ENST00000459979 KLRC1P26715 233 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 MCM2P49736 904 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 FBXO18Q8NFZ0 1043 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 SP7Q8TDD2 431 aaPredicted RBP20.85■□□□□ 0.93
HOXD3-204ENST00000459979 TRAPPC12Q8WVT3 735 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 SEPT8Q92599 483 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 C8orf76Q96K31 380 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 CEP131Q9UPN4 1083 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 SQORQ9Y6N5 450 aa20.85■□□□□ 0.93
HOXD3-204ENST00000459979 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.84■□□□□ 0.93
HOXD3-204ENST00000459979 FAM86C2PA6NEL3 165 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 ZNF862O60290 1169 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 KCNA5P22460 613 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 PLA2G5P39877 138 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 PPP2R5CQ13362 524 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 SAFBQ15424 915 aaKnown RBP eCLIP20.84■□□□□ 0.93
HOXD3-204ENST00000459979 IER5Q5VY09 327 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 MIER3Q7Z3K6 550 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 CKAP2LQ8IYA6 745 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 HAS1Q92839 578 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 APBB2Q92870 758 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 YME1L1Q96TA2 773 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 BACH2Q9BYV9 841 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 NRBP2Q9NSY0 501 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
HOXD3-204ENST00000459979 KDM3AQ9Y4C1 1321 aa20.83■□□□□ 0.93
HOXD3-204ENST00000459979 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.83■□□□□ 0.93
HOXD3-204ENST00000459979 CHMP2AO43633 222 aa20.83■□□□□ 0.93
HOXD3-204ENST00000459979 MRPS6P82932 125 aaKnown RBP20.83■□□□□ 0.93
HOXD3-204ENST00000459979 EPC2Q52LR7 807 aa20.83■□□□□ 0.93
HOXD3-204ENST00000459979 ZBTB10Q96DT7 871 aa20.83■□□□□ 0.93
HOXD3-204ENST00000459979 FAM122AQ96E09 287 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms