RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CCDC26Q8TAB7 109 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 TMEM174Q8WUU8 243 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 SCFD1Q8WVM8 642 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 RIN2Q8WYP3 895 aaPredicted RBP6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 P3H4Q92791 437 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 HPS3Q969F9 1004 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 ATP6V1G3Q96LB4 118 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 TRIM34Q9BYJ4 488 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 EPN3Q9H201 632 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 TMBIM4Q9HC24 238 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 EPB41L5Q9HCM4 733 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 OLFML3Q9NRN5 406 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM114A2Q9NRY5 505 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 TYW1Q9NV66 732 aaKnown RBP6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 ARMCX3Q9UH62 379 aaPredicted RBP6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 STXBP5LQ9Y2K9 1186 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM169AQ9Y6X4 670 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 SMCHD1A6NHR9 2005 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 FER1L6Q2WGJ9 1857 aa6.7□□□□□ -1.34
UBQLN4-202ENST00000459954 COL2A1P02458 1487 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 GOLGA6L10A6NI86 522 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF233A6NK53 670 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 PGRMC1O00264 195 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NKRFO15226 690 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 BUB1O43683 1085 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP1R11O60927 126 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 TOMM70O94826 608 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 FSBPO95073 299 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 EYA4O95677 639 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 HLA-DOAP06340 250 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 AKR1B1P15121 316 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 UCHL3P15374 230 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 HSPA6P17066 643 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NR1D1P20393 614 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 RFX1P22670 979 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 GBP1P32455 592 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CARSP49589 748 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 DRG2P55039 364 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NAP1L1P55209 391 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 EIF3BP55884 814 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 JAM2P57087 298 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 MCCD1P59942 119 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 HDLBPQ00341 1268 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 SLC7A5Q01650 507 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 GUCY2DQ02846 1103 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 SPIRE1Q08AE8 756 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 RAPGEF1Q13905 1077 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 GIT2Q14161 759 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 LRRC41Q15345 812 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 EPHA7Q15375 998 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ECM1Q16610 540 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 AOC3Q16853 763 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 EXOC3L4Q17RC7 722 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ICE2Q659A1 982 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 RPAINQ86UA6 219 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CASKIN2Q8WXE0 1202 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ARL8AQ96BM9 186 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CENPTQ96BT3 561 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CCDC43Q96MW1 224 aaKnown RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 SPAG5Q96R06 1193 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CEP89Q96ST8 783 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NAP1L3Q99457 506 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.341e-7■■■□□ 15.4
UBQLN4-202ENST00000459954 ANO3Q9BYT9 981 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM129AQ9BZQ8 928 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 CPVLQ9H3G5 476 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 YY1AP1Q9H869 796 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 TUFT1Q9NNX1 390 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NLRC4Q9NPP4 1024 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 KCND2Q9NZV8 630 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF219Q9P2Y4 722 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 SEL1LQ9UBV2 794 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 HACL1Q9UJ83 578 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NAGPAQ9UK23 515 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 HDAC9Q9UKV0 1011 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 KIAA1024Q9UPX6 916 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 DNM3Q9UQ16 869 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 NCANO14594 1321 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 ZNF536O15090 1300 aa6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 FRMPD2Q68DX3 1309 aaPredicted RBP6.69□□□□□ -1.34
UBQLN4-202ENST00000459954 COL11A2P13942 1736 aaPredicted RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ADAMTSL1Q8N6G6 1762 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 FAM187AA6NFU0 413 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 E9PMD0 336 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 H0YGN5 161 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PIK3CDO00329 1044 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 NDUFAB1O14561 156 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 MEFVO15553 781 aaPredicted RBP6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 NCK2O43639 380 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ECE2O60344 883 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 PPP1R37O75864 691 aa6.68□□□□□ -1.34
UBQLN4-202ENST00000459954 ERLIN2O94905 339 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms