RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 MTHFD1LQ6UB35 978 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 RUFY4Q6ZNE9 571 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 PBX4Q9BYU1 374 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 TMEM60Q9H2L4 133 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 SEPT9Q9UHD8 586 aaPredicted RBP24.41■■□□□ 1.5
SSNA1-202ENST00000459860 PCDHA2Q9Y5H9 948 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 KLRC1P26715 233 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 SPIRE1Q08AE8 756 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 NBR1Q14596 966 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 BRAPQ7Z569 592 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 RPAINQ86UA6 219 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 USP38Q8NB14 1042 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 NEK9Q8TD19 979 aa24.4■■□□□ 1.5
SSNA1-202ENST00000459860 FAM49AQ9H0Q0 323 aaPredicted RBP24.4■■□□□ 1.5
SSNA1-202ENST00000459860 SMIM35A0A1B0GVV1 85 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 M0QZ92 97 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 LAD1O00515 517 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 DNAJB3Q8WWF6 145 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 PCDHB6Q9Y5E3 794 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 EVPLQ92817 2033 aa24.39■■□□□ 1.49
SSNA1-202ENST00000459860 MAGEB2O15479 319 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 SYT1P21579 422 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 TOB1P50616 345 aaPredicted RBP24.38■■□□□ 1.49
SSNA1-202ENST00000459860 ERMNQ8TAM6 284 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 HERVK_113Q902F9 699 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 LXNQ9BS40 222 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 RAB34Q9BZG1 259 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 CXXC1Q9P0U4 656 aaPredicted RBP24.38■■□□□ 1.49
SSNA1-202ENST00000459860 SIP14410 1827 aa24.38■■□□□ 1.49
SSNA1-202ENST00000459860 DDX11L8A8MPP1 907 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 ZBBXA8MT70 800 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 ZBTB42B2RXF5 422 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 CYP4A11Q02928 519 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 TBC1D8BQ0IIM8 1120 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 IER5Q5VY09 327 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 TRAF7Q6Q0C0 670 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 OTOP2Q7RTS6 562 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 NME8Q8N427 588 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 VWCEQ96DN2 955 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 ZBTB10Q96DT7 871 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 DYDC2Q96IM9 177 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 EIF2AK1Q9BQI3 630 aaKnown RBP24.37■■□□□ 1.49
SSNA1-202ENST00000459860 ZSWIM4Q9H7M6 989 aa24.37■■□□□ 1.49
SSNA1-202ENST00000459860 CHD9Q3L8U1 2897 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 ARID2Q68CP9 1835 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 POTEMA6NI47 508 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 NBNO60934 754 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 C22orf31O95567 290 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 CXCL10P02778 98 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 TMOD1P28289 359 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 TECP42680 631 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 MRPS6P82932 125 aaKnown RBP24.36■■□□□ 1.49
SSNA1-202ENST00000459860 PTGDRQ13258 359 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 MTERF2Q49AM1 385 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 FAM26DQ5JW98 314 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 FERMT3Q86UX7 667 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 METTL13Q8N6R0 699 aa24.36■■□□□ 1.49
SSNA1-202ENST00000459860 NIFKQ9BYG3 293 aaKnown RBP24.36■■□□□ 1.49
SSNA1-202ENST00000459860 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.36■■□□□ 1.49
SSNA1-202ENST00000459860 CNKSR3Q6P9H4 555 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 OTUD6AQ7L8S5 288 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 TPH2Q8IWU9 490 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 C4orf19Q8IY42 314 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 MAP7D2Q96T17 732 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 RGL1Q9NZL6 768 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 TRPV2Q9Y5S1 764 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 CDY2AQ9Y6F7 541 aa24.35■■□□□ 1.49
SSNA1-202ENST00000459860 STX6O43752 255 aa24.34■■□□□ 1.49
SSNA1-202ENST00000459860 BAIAP3O94812 1187 aa24.34■■□□□ 1.49
SSNA1-202ENST00000459860 PDIA4P13667 645 aaKnown RBP24.34■■□□□ 1.49
SSNA1-202ENST00000459860 CTTNQ14247 550 aaKnown RBP24.34■■□□□ 1.49
SSNA1-202ENST00000459860 HAUS3Q68CZ6 603 aa24.34■■□□□ 1.49
SSNA1-202ENST00000459860 CCDC43Q96MW1 224 aaKnown RBP24.34■■□□□ 1.49
SSNA1-202ENST00000459860 JPH2Q9BR39 696 aaPredicted RBP24.34■■□□□ 1.49
SSNA1-202ENST00000459860 PPME1Q9Y570 386 aa24.34■■□□□ 1.49
SSNA1-202ENST00000459860 TET1Q8NFU7 2136 aa24.34■■□□□ 1.49
SSNA1-202ENST00000459860 YWHABP31946 246 aaKnown RBP24.33■■□□□ 1.49
SSNA1-202ENST00000459860 PRPHP41219 470 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 FXR2P51116 673 aaKnown RBP eCLIP24.33■■□□□ 1.49
SSNA1-202ENST00000459860 MGAT3Q09327 533 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 MBTPS1Q14703 1052 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 EFCAB12Q6NXP0 572 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 ANO5Q75V66 913 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 C4orf32Q8N8J7 132 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 SEPT8Q92599 483 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 STK24Q9Y6E0 443 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 SLC4A7Q9Y6M7 1214 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 LOXHD1Q8IVV2 1947 aa24.33■■□□□ 1.49
SSNA1-202ENST00000459860 EFCAB14O75071 495 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 SLITRK3O94933 977 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 BMP15O95972 392 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 CHRNA1P02708 482 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 KCNJ6P48051 423 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 TMEM62Q0P6H9 643 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 IKBKEQ14164 716 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 GPNMBQ14956 572 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 TARBP2Q15633 366 aaKnown RBP24.32■■□□□ 1.48
SSNA1-202ENST00000459860 PLA2G4FQ68DD2 849 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 DTHD1Q6ZMT9 781 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 EXOC8Q8IYI6 725 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms