RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CDR1P51861 262 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 PRELPP51888 382 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 ZNF131P52739 623 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 RAD51AP2Q09MP3 1159 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 PABPC4Q13310 644 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC3-202ENST00000459727 EPHA7Q15375 998 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FAM182BQ5T319 152 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 CFAP58Q5T655 872 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 LRCH2Q5VUJ6 765 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FKBP1CQ5VVH2 108 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
HDAC3-202ENST00000459727 LRIG3Q6UXM1 1119 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 MAATS1Q7Z4T9 603 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FAM186BQ8IYM0 893 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FAM133AQ8N9E0 248 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 USP38Q8NB14 1042 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 SLC5A5Q92911 643 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 RIT2Q99578 217 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 VPS33BQ9H267 617 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 BHMT2Q9H2M3 363 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 TMEM206Q9H813 350 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 SUGCTQ9HAC7 445 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 GINM1Q9NU53 330 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-202ENST00000459727 MAP3K20Q9NYL2 800 aaKnown RBP9.66□□□□□ -0.86
HDAC3-202ENST00000459727 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 FAM198AQ9UFP1 575 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 TMX2Q9Y320 296 aa9.66□□□□□ -0.86
HDAC3-202ENST00000459727 ASTN1O14525 1302 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 NCANO14594 1321 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 ATXN2Q99700 1313 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 ZC3H4Q9UPT8 1303 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 MYH7BA7E2Y1 1941 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 DDTLA6NHG4 134 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 FAM86B1E9PN63 330 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 GAS7O60861 476 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 ERLIN2O94905 339 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 HEXIM1O94992 359 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TFRCP02786 760 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 FAM86B2P0C5J1 330 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 BCRP11274 1271 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 KRT13P13646 458 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 KLRC1P26715 233 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 ABCD1P33897 745 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 JAM2P57087 298 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 SKOR1P84550 965 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TCP10Q12799 353 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 DCAF17Q5H9S7 520 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 EMC10Q5UCC4 262 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TCERG1LQ5VWI1 586 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 SLFN11Q7Z7L1 901 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 CROCCP2Q86T23 111 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 SLC35C1Q96A29 364 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 RUNDC3BQ96NL0 473 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 HSD17B14Q9BPX1 270 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TEKT3Q9BXF9 490 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 STK33Q9BYT3 514 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 RANBP17Q9H2T7 1088 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 RBM12Q9NTZ6 932 aaKnown RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TBC1D7Q9P0N9 293 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 FEM1BQ9UK73 627 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-202ENST00000459727 TFR2Q9UP52 801 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 SIPA1L1O43166 1804 aa9.65□□□□□ -0.86
HDAC3-202ENST00000459727 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.87
HDAC3-202ENST00000459727 LOXHD1Q8IVV2 1947 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 IGLV3-22A0A075B6J6 115 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 BUB1O43683 1085 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 TBC1D12O60347 775 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 PSMD10O75832 226 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 AKAP3O75969 853 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 GH2P01242 217 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MMP10P09238 476 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 TMEM253P0C7T8 217 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MYBP10242 640 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 SOX5P35711 763 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 STAT3P40763 770 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 NOP2P46087 812 aaKnown RBP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 PTK2Q05397 1052 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 ENPEPQ07075 957 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 TCEAL1Q15170 157 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 USH1GQ495M9 461 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 CEP55Q53EZ4 464 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RINT1Q6NUQ1 792 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RUFY4Q6ZNE9 571 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MICALCLQ6ZW33 695 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms