RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TRIML1Q8N9V2 468 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 GPR20Q99678 358 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 BPIFA3Q9BQP9 254 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
RIF1-208ENST00000457745 NT5C3AQ9H0P0 336 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 MAGEF1Q9HAY2 307 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 XPNPEP1Q9NQW7 623 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 FANCLQ9NW38 375 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 ADD3Q9UEY8 706 aaKnown RBP9.73□□□□□ -0.85
RIF1-208ENST00000457745 ZMYM2Q9UBW7 1377 aa9.73□□□□□ -0.85
RIF1-208ENST00000457745 USO1O60763 962 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 HIP1RO75146 1068 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 STAM2O75886 525 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 P4HBP07237 508 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 ZNF865P0CJ78 1059 aaPredicted RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 ZNF18P17022 549 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 NMT1P30419 496 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 JAK3P52333 1124 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 PRKCEQ02156 737 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 CELF3Q5SZQ8 465 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 TTI2Q6NXR4 508 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 MAEAQ7L5Y9 396 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 NELFBQ8WX92 580 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 EEF2KMTQ96G04 330 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 PDLIM2Q96JY6 352 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 PANK4Q9NVE7 773 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 DNM3Q9UQ16 869 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
RIF1-208ENST00000457745 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 PCDHA10Q9Y5I2 948 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 SYNRGQ9UMZ2 1314 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 SIP14410 1827 aa9.72□□□□□ -0.85
RIF1-208ENST00000457745 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ASB14A6NK59 587 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ZBTB42B2RXF5 422 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 LGR5O75473 907 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ADCY5O95622 1261 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 HOXC6P09630 235 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 YWHABP31946 246 aaKnown RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 TCF7P36402 384 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 ZNF75DP51815 510 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 EMP3P54852 163 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 PSMC5P62195 406 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 MYL5Q02045 173 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 NOGQ13253 232 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 DRP2Q13474 957 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 UVSSAQ2YD98 709 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 GNPTABQ3T906 1256 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 L1TD1Q5T7N2 865 aaKnown RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 CDKAL1Q5VV42 579 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ANKRD40Q6AI12 368 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 DPP9Q86TI2 863 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 C4orf19Q8IY42 314 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 NEK9Q8TD19 979 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 TRAPPC12Q8WVT3 735 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 TRIB2Q92519 343 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 TINF2Q9BSI4 451 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 KIFC3Q9BVG8 833 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 ZSWIM4Q9H7M6 989 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 PDLIM7Q9NR12 457 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 EXOC1Q9NV70 894 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 RNF186Q9NXI6 227 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 TSKSQ9UJT2 592 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 NFE2L3Q9Y4A8 694 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 MAFBQ9Y5Q3 323 aaPredicted RBP9.71□□□□□ -0.86
RIF1-208ENST00000457745 IVNS1ABPQ9Y6Y0 642 aa9.71□□□□□ -0.86
RIF1-208ENST00000457745 MYADML2A6NDP7 307 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 TISP43B9A030 160 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
RIF1-208ENST00000457745 IKBKBO14920 756 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 MAFGO15525 162 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 STRNO43815 780 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 TRPA1O75762 1119 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 PRPF6O94906 941 aaKnown RBP9.7□□□□□ -0.86
RIF1-208ENST00000457745 EDN1P05305 212 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ZNF286BP0CG31 522 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 MARK3P27448 753 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 SFNP31947 248 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 PSMC4P43686 418 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ZNF131P52739 623 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 INHBEP58166 350 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 LACTBP83111 547 aaPredicted RBP9.7□□□□□ -0.86
RIF1-208ENST00000457745 PRKCZQ05513 592 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ACVR2BQ13705 512 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 HIC1Q14526 733 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 TARBP2Q15633 366 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms