RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 KIAA0319LQ8IZA0 1049 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 NME8Q8N427 588 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 SUSD6Q92537 303 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 PHOX2BQ99453 314 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 BARX2Q9UMQ3 279 aaPredicted RBP13.59□□□□□ -0.23
LMCD1-206ENST00000456506 NOC2LQ9Y3T9 749 aaKnown RBP13.59□□□□□ -0.23
LMCD1-206ENST00000456506 ARID2Q68CP9 1835 aa13.59□□□□□ -0.23
LMCD1-206ENST00000456506 COL1A2P08123 1366 aa13.58□□□□□ -0.23
LMCD1-206ENST00000456506 IGLV3-22A0A075B6J6 115 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 FSCN2O14926 492 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 STAG3L1P0CL83 205 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 KLRC1P26715 233 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 SREBF1P36956 1147 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 SLC26A2P50443 739 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 ERVFC1P60507 584 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 FAM189BP81408 668 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 FAM102BQ5T8I3 360 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 IER5LQ5T953 404 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 PPP1R18Q6NYC8 613 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 MICU3Q86XE3 530 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-206ENST00000456506 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 CWH43Q9H720 699 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-206ENST00000456506 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-206ENST00000456506 SLC12A7Q9Y666 1083 aa13.58□□□□□ -0.24
LMCD1-206ENST00000456506 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 M0QZ92 97 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 ZXDAP98168 799 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 UBE3AQ05086 875 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 DSC3Q14574 896 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 FAM43BQ6ZT52 329 aaPredicted RBP13.57□□□□□ -0.24
LMCD1-206ENST00000456506 TRIM67Q6ZTA4 783 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 NIPA1Q7RTP0 329 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 RBM23Q86U06 439 aaKnown RBP13.57□□□□□ -0.24
LMCD1-206ENST00000456506 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 ANO3Q9BYT9 981 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
LMCD1-206ENST00000456506 TMEM221A6NGB7 291 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 M0R296 226 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 PER2O15055 1255 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 HBP1O60381 514 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 GPR32O75388 356 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 FGF18O76093 207 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 C22orf31O95567 290 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 FOSP01100 380 aaPredicted RBP13.56□□□□□ -0.24
LMCD1-206ENST00000456506 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
LMCD1-206ENST00000456506 TCF15Q12870 199 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 NFX1Q12986 1120 aaKnown RBP13.56□□□□□ -0.24
LMCD1-206ENST00000456506 DUSP6Q16828 381 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 LINC01465Q8N7H1 131 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
LMCD1-206ENST00000456506 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 ASIC4Q96FT7 647 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 ADAM2Q99965 735 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 S1PR5Q9H228 398 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 ZDBF2Q9HCK1 2354 aa13.56□□□□□ -0.24
LMCD1-206ENST00000456506 CFAP54Q96N23 3096 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 ATF7P17544 494 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-206ENST00000456506 NAPAP54920 295 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-206ENST00000456506 TLE6Q9H808 572 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
LMCD1-206ENST00000456506 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 LRFN2Q9ULH4 789 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 PCDHB7Q9Y5E2 793 aa13.55□□□□□ -0.24
LMCD1-206ENST00000456506 SMCO2A6NFE2 343 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 EDIL3O43854 480 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 CYP3A4P08684 503 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 FGFR1P11362 822 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 CDC27P30260 824 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 ADCY7P51828 1080 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 PLCB3Q01970 1234 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 TCEANC2Q96MN5 208 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms