RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 LAMC1P11047 1609 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 CCNA1P78396 465 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 MECOMQ03112 1051 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 GUF1Q8N442 669 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 OATP04181 439 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 PLS3P13797 630 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 TFDP1Q14186 410 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 PLCB4Q15147 1175 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 TTLL6Q8N841 843 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 DNAJC12Q9UKB3 198 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 TTC36A6NLP5 189 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 RASA4BC9J798 803 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 GYG2O15488 501 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
SEC16A-207ENST00000453963 RASA4O43374 803 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 ZBTB17Q13105 803 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 BBS9Q3SYG4 887 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 MID2Q9UJV3 735 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 CHRNA3P32297 505 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 SLC16A2P36021 539 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 ECE1P42892 770 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 DEUP1Q05D60 604 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 KCNB1Q14721 858 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 JADE1Q6IE81 842 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 PDZD8Q8NEN9 1154 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 PPWD1Q96BP3 646 aaKnown RBP12.93□□□□□ -0.34
SEC16A-207ENST00000453963 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
SEC16A-207ENST00000453963 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■□□ 15.9
SEC16A-207ENST00000453963 SORBS3O60504 671 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 ACTN1P12814 892 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 STX1BP61266 288 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 KIF22Q14807 665 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 NME8Q8N427 588 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 DDX47Q9H0S4 455 aaKnown RBP12.93□□□□□ -0.34
SEC16A-207ENST00000453963 EPN3Q9H201 632 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 KMT5AQ9NQR1 393 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 SCINQ9Y6U3 715 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
SEC16A-207ENST00000453963 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 NCK2O43639 380 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 SLC7A3Q8WY07 619 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 GRAMD1AQ96CP6 724 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 TTC25Q96NG3 672 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 ADCY10Q96PN6 1610 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 FOXN1O15353 648 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 SPAG7O75391 227 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 MDH1P40925 334 aaKnown RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 GPC5P78333 572 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 ATP2C1P98194 919 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 HDLBPQ00341 1268 aaKnown RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 SPDL1Q96EA4 605 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 SEPT10Q9P0V9 454 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 KRT37O76014 449 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 KRT80Q6KB66 452 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 LRRC37BQ96QE4 947 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 TOM1L1O75674 476 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 EPM2AIP1Q7L775 607 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
SEC16A-207ENST00000453963 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
SEC16A-207ENST00000453963 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 SAT1P21673 171 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ITKQ08881 620 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 DALRD3Q5D0E6 543 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 DARS2Q6PI48 645 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
SEC16A-207ENST00000453963 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 MAML1Q92585 1016 aa12.91□□□□□ -0.34
SEC16A-207ENST00000453963 FAM193BQ96PV7 902 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms