RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PTPN21Q16825 1174 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 FAM160B1Q5W0V3 765 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 TMEM161AQ9NX61 479 aa16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
LYSMD3-202ENST00000453259 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 FSCN2O14926 492 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 PLEKHA8P1O95397 391 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 TCF15Q12870 199 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 SPOUT1Q5T280 376 aaKnown RBP16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 THNSL1Q8IYQ7 743 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 RSPH1Q8WYR4 309 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 ASIC4Q96FT7 647 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 TAF6LQ9Y6J9 622 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 KMT2EQ8IZD2 1858 aa16.3■□□□□ 0.2
LYSMD3-202ENST00000453259 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 CARNS1A5YM72 827 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 C9IYK1 514 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 CSPG5O95196 566 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 FOXK2Q01167 660 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 KCNC3Q14003 757 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 UBE2SQ16763 222 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 IER5LQ5T953 404 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 UBALD2Q8IYN6 164 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 FANCBQ8NB91 859 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 ADAM2Q99965 735 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 RIC8AQ9NPQ8 531 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 ZDBF2Q9HCK1 2354 aa16.29■□□□□ 0.2
LYSMD3-202ENST00000453259 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 MEIS1O00470 390 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 KLRC1P26715 233 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 CRYBB1P53674 252 aaPredicted RBP16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 FAM189BP81408 668 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 TRAPPC12Q8WVT3 735 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 NECTIN4Q96NY8 510 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 TMEM117Q9H0C3 514 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 ST3GAL5Q9UNP4 418 aa16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 RBM8AQ9Y5S9 174 aaKnown RBP16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 FNDC1Q4ZHG4 1894 aaPredicted RBP16.28■□□□□ 0.2
LYSMD3-202ENST00000453259 PPFIA3O75145 1194 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 AVPR2P30518 371 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 SREBF1P36956 1147 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 KRT17Q04695 432 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 MCTP2Q6DN12 878 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 ANKRD54Q6NXT1 300 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 LRRC43Q8N309 656 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 ZBTB10Q96DT7 871 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 S1PR5Q9H228 398 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 NOC2LQ9Y3T9 749 aaKnown RBP16.27■□□□□ 0.2
LYSMD3-202ENST00000453259 CACNA1HO95180 2353 aa16.27■□□□□ 0.19
LYSMD3-202ENST00000453259 LOXHD1Q8IVV2 1947 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 BACH1O14867 736 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 MGEA5O60502 916 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 GATMP50440 423 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 ERVFC1P60507 584 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 ITIH3Q06033 890 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 TMEM266Q2M3C6 531 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 MIS18BP1Q6P0N0 1132 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 CASP10Q92851 521 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 TYW1Q9NV66 732 aaKnown RBP16.26■□□□□ 0.19
LYSMD3-202ENST00000453259 PER2O15055 1255 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 GFRA3O60609 400 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 ARP10275 920 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 PDE4AP27815 886 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 ADCY7P51828 1080 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 NAPAP54920 295 aa16.25■□□□□ 0.19
LYSMD3-202ENST00000453259 MTMR3Q13615 1198 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms