RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NRCAMQ92823 1304 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 PRPF40AO75400 957 aaKnown RBP12.93□□□□□ -0.34
SCN9A-204ENST00000452182 PFKFB1P16118 471 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 PLCG1P19174 1290 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 ITGA7Q13683 1181 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 TARBP2Q15633 366 aaKnown RBP12.93□□□□□ -0.34
SCN9A-204ENST00000452182 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 ZNF484Q5JVG2 852 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 UBE2Q1Q7Z7E8 422 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 TNS4Q8IZW8 715 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 C7orf31Q8N865 590 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 KCNH3Q9ULD8 1083 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
SCN9A-204ENST00000452182 A0A087X0B3 334 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 A0A1B0GVL5 298 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 RRN3P2A6NIE6 340 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 ZBTB42B2RXF5 422 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 EYA4O95677 639 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 INSRRP14616 1297 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 PSEN1P49768 467 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 RARRES1P49788 294 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 PSMC6P62333 389 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 E2F4Q16254 413 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 NECAB2Q7Z6G3 386 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 PAWRQ96IZ0 340 aaKnown RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 SENP6Q9GZR1 1112 aaPredicted RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 CUEDC2Q9H467 287 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 SEPT9Q9UHD8 586 aaPredicted RBP12.92□□□□□ -0.34
SCN9A-204ENST00000452182 GTF2IRD1Q9UHL9 959 aa12.92□□□□□ -0.34
SCN9A-204ENST00000452182 E9PMD0 336 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 ARVCFO00192 962 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 ZBTB39O15060 712 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 GADD45BO75293 160 aaPredicted RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 GNAT1P11488 350 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 CDK7P50613 346 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 NDUFA8P51970 172 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 ADAM17P78536 824 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 SNX17Q15036 470 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 KCNK18Q7Z418 384 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 EXOC8Q8IYI6 725 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 RAD54LQ92698 747 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 VTI1AQ96AJ9 217 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 BLOC1S4Q9NUP1 217 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 USP25Q9UHP3 1055 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 POLR2DO15514 142 aaKnown RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 STAT6P42226 847 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 SYKP43405 635 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 FAM160A1Q05DH4 1040 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 GRIK4Q16099 956 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 XKR9Q5GH70 373 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 SLC39A5Q6ZMH5 540 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 PDILTQ8N807 584 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 SYT2Q8N9I0 419 aaPredicted RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 LRRC15Q8TF66 581 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 LMBR1Q8WVP7 490 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 LARP4BQ92615 738 aaKnown RBP12.91□□□□□ -0.34
SCN9A-204ENST00000452182 CEP170P1Q96L14 293 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 PLIN2Q99541 437 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 BHMT2Q9H2M3 363 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 MAGEF1Q9HAY2 307 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
SCN9A-204ENST00000452182 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 C17orf102A2RUQ5 167 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 MAGEB2O15479 319 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 DGAT1O75907 488 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 MCM4P33991 863 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 RFC5P40937 340 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 SLC12A3P55017 1021 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 NPEPPSP55786 919 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
SCN9A-204ENST00000452182 MTERF2Q49AM1 385 aa12.9□□□□□ -0.34
SCN9A-204ENST00000452182 MARCH8Q5T0T0 291 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms