RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 FNDC1Q4ZHG4 1894 aaPredicted RBP9.86□□□□□ -0.83
RFX3-209ENST00000451859 PRR16Q569H4 304 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 PLEKHG4Q58EX7 1191 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 C6orf132Q5T0Z8 1188 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 CCDC148Q8NFR7 591 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 GDPD5Q8WTR4 605 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 IFIH1Q9BYX4 1025 aaKnown RBP9.86□□□□□ -0.83
RFX3-209ENST00000451859 ZMYND12Q9H0C1 365 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 PDRG1Q9NUG6 133 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 TCEAL9Q9UHQ7 104 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 ARID2Q68CP9 1835 aa9.86□□□□□ -0.83
RFX3-209ENST00000451859 IGLV3-22A0A075B6J6 115 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 IPO5O00410 1097 aaKnown RBP9.85□□□□□ -0.83
RFX3-209ENST00000451859 MEIS1O00470 390 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 GTPBP6O43824 516 aaPredicted RBP9.85□□□□□ -0.83
RFX3-209ENST00000451859 CAND2O75155 1236 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 CHRNA1P02708 482 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 IFNAR1P17181 557 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 IBSPP21815 317 aaPredicted RBP9.85□□□□□ -0.83
RFX3-209ENST00000451859 STAT5BP51692 787 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 SSRP1Q08945 709 aaKnown RBP9.85□□□□□ -0.83
RFX3-209ENST00000451859 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 TAF2Q6P1X5 1199 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 RSPH3Q86UC2 560 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 CCDC60Q8IWA6 550 aaPredicted RBP9.85□□□□□ -0.83
RFX3-209ENST00000451859 CKAP2LQ8IYA6 745 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 FBXL16Q8N461 479 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 BICD2Q8TD16 824 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 AIFM3Q96NN9 605 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 RAD9AQ99638 391 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 ZNF577Q9BSK1 485 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 THEGQ9P2T0 379 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 CDY2AQ9Y6F7 541 aa9.85□□□□□ -0.83
RFX3-209ENST00000451859 XIRP2A4UGR9 3374 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 NRG2O14511 850 aaPredicted RBP9.84□□□□□ -0.83
RFX3-209ENST00000451859 CHMP2AO43633 222 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 CYP3A4P08684 503 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 MRPS6P82932 125 aaKnown RBP9.84□□□□□ -0.83
RFX3-209ENST00000451859 SETQ01105 290 aaPredicted RBP9.84□□□□□ -0.83
RFX3-209ENST00000451859 GRB10Q13322 594 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 LPIN1Q14693 890 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 MARCH8Q5T0T0 291 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 FAM160B1Q5W0V3 765 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 SWSAP1Q6NVH7 229 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 MIS18BP1Q6P0N0 1132 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 NIPA1Q7RTP0 329 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 TEX2Q8IWB9 1127 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 CRYGNQ8WXF5 182 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 GJA10Q969M2 543 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 PPP1R16BQ96T49 567 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 TM6SF1Q9BZW5 370 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 SAMM50Q9Y512 469 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 MTCH2Q9Y6C9 303 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 PLXNA4Q9HCM2 1894 aa9.84□□□□□ -0.83
RFX3-209ENST00000451859 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 NCOR1O75376 2440 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 MBLAC1A4D2B0 266 aaPredicted RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 LINC01553A4QN01 128 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 RRN3P2A6NIE6 340 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 M0QZ92 97 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 DHX15O43143 795 aaKnown RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 DEXIO95424 95 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 EVCP57679 992 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 MGAT3Q09327 533 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 TJAP1Q5JTD0 557 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 FAM26DQ5JW98 314 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 MCTP2Q6DN12 878 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 ABHD15Q6UXT9 468 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 PLPPR4Q7Z2D5 763 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 APBB2Q92870 758 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 TGS1Q96RS0 853 aaKnown RBP9.83□□□□□ -0.84
RFX3-209ENST00000451859 YME1L1Q96TA2 773 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 C17orf80Q9BSJ5 609 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 ZNF302Q9NR11 478 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 KCNJ14Q9UNX9 436 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 GINS2Q9Y248 185 aa9.83□□□□□ -0.84
RFX3-209ENST00000451859 TTC28Q96AY4 2481 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 CSPG5O95196 566 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 ATG7O95352 703 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 KLRC1P26715 233 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 CD52P31358 61 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 TFF2Q03403 129 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 SCRN1Q12765 414 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 TMEM266Q2M3C6 531 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 MTHFD1LQ6UB35 978 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 TBCKQ8TEA7 893 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 ATP8B4Q8TF62 1192 aa9.82□□□□□ -0.84
RFX3-209ENST00000451859 TNPO1Q92973 898 aaKnown RBP9.82□□□□□ -0.84
RFX3-209ENST00000451859 ZNF274Q96GC6 653 aaPredicted RBP9.82□□□□□ -0.84
RFX3-209ENST00000451859 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
RFX3-209ENST00000451859 AGO3Q9H9G7 860 aaKnown RBP9.82□□□□□ -0.84
RFX3-209ENST00000451859 SUGCTQ9HAC7 445 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms