RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 VPS54Q9P1Q0 977 aa30.77■■■□□ 2.52
USP42-204ENST00000451154 IL9P15248 144 aa30.76■■■□□ 2.51
USP42-204ENST00000451154 IFNAR1P17181 557 aa30.76■■■□□ 2.51
USP42-204ENST00000451154 IBSPP21815 317 aaPredicted RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 SETQ01105 290 aaPredicted RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 ZNF746Q6NUN9 644 aaPredicted RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 BICD2Q8TD16 824 aa30.76■■■□□ 2.51
USP42-204ENST00000451154 NEK9Q8TD19 979 aa30.76■■■□□ 2.51
USP42-204ENST00000451154 RNF26Q9BY78 433 aaPredicted RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 NOC2LQ9Y3T9 749 aaKnown RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 MAFBQ9Y5Q3 323 aaPredicted RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 MRPL42Q9Y6G3 142 aaKnown RBP30.76■■■□□ 2.51
USP42-204ENST00000451154 COL1A2P08123 1366 aa30.76■■■□□ 2.51
USP42-204ENST00000451154 STAG3L1P0CL83 205 aa30.75■■■□□ 2.51
USP42-204ENST00000451154 CIITAP33076 1130 aa30.75■■■□□ 2.51
USP42-204ENST00000451154 PAN2Q504Q3 1202 aaKnown RBP30.75■■■□□ 2.51
USP42-204ENST00000451154 PABPC5Q96DU9 382 aaKnown RBP30.75■■■□□ 2.51
USP42-204ENST00000451154 PPP1R16BQ96T49 567 aa30.75■■■□□ 2.51
USP42-204ENST00000451154 ALG13Q9NP73 1137 aaKnown RBP30.75■■■□□ 2.51
USP42-204ENST00000451154 PCDHA10Q9Y5I2 948 aa30.75■■■□□ 2.51
USP42-204ENST00000451154 GRXCR2A6NFK2 248 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 EDIL3O43854 480 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 CSPG5O95196 566 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 PSAPP07602 524 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 EVCP57679 992 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 FAM178BQ8IXR5 827 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 CMTR2Q8IYT2 770 aaKnown RBP30.74■■■□□ 2.51
USP42-204ENST00000451154 BBXQ8WY36 941 aaPredicted RBP30.74■■■□□ 2.51
USP42-204ENST00000451154 LMAN2LQ9H0V9 348 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 ERVK-5Q9HDB9 667 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 GABBR1Q9UBS5 961 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 ATG2AQ2TAZ0 1938 aa30.74■■■□□ 2.51
USP42-204ENST00000451154 MGEA5O60502 916 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 RPS6KA5O75582 802 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 GATMP50440 423 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 RUFY3Q7L099 469 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 SMAP1Q8IYB5 467 aaPredicted RBP30.73■■■□□ 2.51
USP42-204ENST00000451154 CCDC148Q8NFR7 591 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 TMEM40Q8WWA1 233 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 LENG9Q96B70 501 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 PLVAPQ9BX97 442 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 CLDND1Q9NY35 253 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 TCEAL9Q9UHQ7 104 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 LRFN2Q9ULH4 789 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 PLAGL2Q9UPG8 496 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 SAMM50Q9Y512 469 aa30.73■■■□□ 2.51
USP42-204ENST00000451154 C22orf31O95567 290 aa30.72■■■□□ 2.51
USP42-204ENST00000451154 TOB2Q14106 344 aaPredicted RBP30.72■■■□□ 2.51
USP42-204ENST00000451154 COL19A1Q14993 1142 aa30.72■■■□□ 2.51
USP42-204ENST00000451154 METTL13Q8N6R0 699 aa30.72■■■□□ 2.51
USP42-204ENST00000451154 LARP6Q9BRS8 491 aaKnown RBP30.72■■■□□ 2.51
USP42-204ENST00000451154 ZSWIM6Q9HCJ5 1215 aa30.72■■■□□ 2.51
USP42-204ENST00000451154 ST3GAL5Q9UNP4 418 aa30.72■■■□□ 2.51
USP42-204ENST00000451154 WDR81Q562E7 1941 aa30.71■■■□□ 2.51
USP42-204ENST00000451154 NLRP5P59047 1200 aa30.71■■■□□ 2.51
USP42-204ENST00000451154 KIZQ2M2Z5 673 aa30.71■■■□□ 2.51
USP42-204ENST00000451154 PUS10Q3MIT2 529 aaKnown RBP30.71■■■□□ 2.51
USP42-204ENST00000451154 C5orf42Q9H799 3197 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 VTNP04004 478 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 SARSP49591 514 aaKnown RBP30.7■■■□□ 2.51
USP42-204ENST00000451154 HYAL1Q12794 435 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 CAMK1Q14012 370 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 GJD3Q8N144 294 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 OSMRQ99650 979 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 ADAM2Q99965 735 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 PCDHB7Q9Y5E2 793 aa30.7■■■□□ 2.51
USP42-204ENST00000451154 MSH4O15457 936 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 GTF2F1P35269 517 aaKnown RBP eCLIP30.69■■■□□ 2.5
USP42-204ENST00000451154 LTBRP36941 435 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 CRYBB1P53674 252 aaPredicted RBP30.69■■■□□ 2.5
USP42-204ENST00000451154 SSRP1Q08945 709 aaKnown RBP30.69■■■□□ 2.5
USP42-204ENST00000451154 SPPL3Q8TCT6 385 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 P2RX5Q93086 422 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 IGFLR1Q9H665 355 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 SH3GLB2Q9NR46 395 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 CYP46A1Q9Y6A2 500 aa30.69■■■□□ 2.5
USP42-204ENST00000451154 DENND3A2RUS2 1198 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 GPR182O15218 404 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 NCK2O43639 380 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 GPR32O75388 356 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 MMP1P03956 469 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 ITGB1P05556 798 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 DNAJB1P25685 340 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 SSTR3P32745 418 aaPredicted RBP30.68■■■□□ 2.5
USP42-204ENST00000451154 USP11P51784 963 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 KLHL23Q8NBE8 558 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 GJA10Q969M2 543 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 LRFN3Q9BTN0 628 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 DISC1Q9NRI5 854 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 RGS18Q9NS28 235 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 KIAA1671Q9BY89 1806 aa30.68■■■□□ 2.5
USP42-204ENST00000451154 WDR64B1ANS9 1081 aa30.67■■■□□ 2.5
USP42-204ENST00000451154 CLCN3P51790 818 aa30.67■■■□□ 2.5
USP42-204ENST00000451154 CTC1Q2NKJ3 1217 aa30.67■■■□□ 2.5
USP42-204ENST00000451154 ODR4Q5SWX8 454 aa30.67■■■□□ 2.5
USP42-204ENST00000451154 TRIM22Q8IYM9 498 aa30.67■■■□□ 2.5
USP42-204ENST00000451154 ZNF862O60290 1169 aa30.66■■■□□ 2.5
USP42-204ENST00000451154 DLX2Q07687 328 aaPredicted RBP30.66■■■□□ 2.5
USP42-204ENST00000451154 NAALADL2Q58DX5 795 aa30.66■■■□□ 2.5
USP42-204ENST00000451154 FAM102BQ5T8I3 360 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms