RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 APBB2Q92870 758 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 PHF20Q9BVI0 1012 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 GABBR1Q9UBS5 961 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 TCEAL9Q9UHQ7 104 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 PRRC2BQ5JSZ5 2229 aaKnown RBP19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 TDP2O95551 362 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 MMP1P03956 469 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 PSAPP07602 524 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 KRT2P35908 639 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 KRT76Q01546 638 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 GUCY1B3Q02153 619 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 GRB10Q13322 594 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 IER5Q5VY09 327 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 PRUNE2Q8WUY3 3088 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 TOP1MTQ969P6 601 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 COL25A1Q9BXS0 654 aaPredicted RBP19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 AGO3Q9H9G7 860 aaKnown RBP19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 INSL6Q9Y581 213 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 PCDHA10Q9Y5I2 948 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 TRPV2Q9Y5S1 764 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 MTCH2Q9Y6C9 303 aa19.21■□□□□ 0.67
PRPF40A-204ENST00000450303 UNC80Q8N2C7 3258 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 CHMP2AO43633 222 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 GTPBP6O43824 516 aaPredicted RBP19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 CD52P31358 61 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 MCTP1Q6DN14 999 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 DAGLBQ8NCG7 672 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 GDPD5Q8WTR4 605 aa19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 MAFBQ9Y5Q3 323 aaPredicted RBP19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 COL4A4P53420 1690 aaPredicted RBP19.2■□□□□ 0.66
PRPF40A-204ENST00000450303 A0A0C4DFX4 3053 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 SMIM35A0A1B0GVV1 85 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 ZBTB42B2RXF5 422 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 M0QZ92 97 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 ENPP3O14638 875 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 GAS7O60861 476 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 HTRA4P83105 476 aaPredicted RBP19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 NONOQ15233 471 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 INF2Q27J81 1249 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 ZNF484Q5JVG2 852 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 SMAP1Q8IYB5 467 aaPredicted RBP19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 SLC5A5Q92911 643 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 TGS1Q96RS0 853 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 YME1L1Q96TA2 773 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 C17orf80Q9BSJ5 609 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 TEKT3Q9BXF9 490 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 CELF4Q9BZC1 486 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 UNC45AQ9H3U1 944 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 DISC1Q9NRI5 854 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 GINS2Q9Y248 185 aa19.19■□□□□ 0.66
PRPF40A-204ENST00000450303 WDR64B1ANS9 1081 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 LPXNO60711 386 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 ERVK-21P61565 698 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 NFKBIBQ15653 356 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 Q4G0T1 1027 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 LRCH2Q5VUJ6 765 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 DIS3L2Q8IYB7 885 aaKnown RBP19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 BBXQ8WY36 941 aaPredicted RBP19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 PPP1R16BQ96T49 567 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 SUGCTQ9HAC7 445 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 CDHR5Q9HBB8 845 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 COL1A2P08123 1366 aa19.18■□□□□ 0.66
PRPF40A-204ENST00000450303 POU3F3P20264 500 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 SKIV2LQ15477 1246 aaKnown RBP19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 UGCGQ16739 394 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 KRT25Q7Z3Z0 450 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 KIAA0319LQ8IZA0 1049 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 NME8Q8N427 588 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 RIT2Q99578 217 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 ZSCAN16Q9H4T2 348 aaPredicted RBP19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 MTMR6Q9Y217 621 aa19.17■□□□□ 0.66
PRPF40A-204ENST00000450303 CYP3A7-CYP3A51PA0A087WV96 503 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 ZNF862O60290 1169 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 PSMD10O75832 226 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 C22orf31O95567 290 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 RPLP2P05387 115 aaKnown RBP19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 ZSCAN22P10073 491 aaPredicted RBP19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 CYP3A7P24462 503 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 DDIT3P35638 169 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 TMEM266Q2M3C6 531 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 LETM2Q2VYF4 491 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 RTN4RL1Q86UN2 441 aaPredicted RBP19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 METTL13Q8N6R0 699 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 SP7Q8TDD2 431 aaPredicted RBP19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 LINC01599Q8WXQ3 324 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 PADI3Q9ULW8 664 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 IGSF9BQ9UPX0 1349 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 TRANK1O15050 2925 aa19.16■□□□□ 0.66
PRPF40A-204ENST00000450303 BTBD18B2RXH4 712 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 SLC37A4O43826 429 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 IBSPP21815 317 aaPredicted RBP19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 PIK3AP1Q6ZUJ8 805 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 MIER3Q7Z3K6 550 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 BRAPQ7Z569 592 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 FBXO22Q8NEZ5 403 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms