RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SEC63Q9UGP8 760 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 MTO1Q9Y2Z2 717 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ADGRG1Q9Y653 693 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PXDNLA1KZ92 1463 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 A2ML1A8K2U0 1454 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ITSN1Q15811 1721 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 GOLGA8IPA6NC78 632 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 VWA3AA6NCI4 1184 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PIK3CDO00329 1044 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SLC27A2O14975 620 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CALUO43852 315 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 GAS2O43903 313 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 PGM3O95394 542 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ASS1P00966 412 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 UBTFL6P0CB48 400 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ATF2P15336 505 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 HOXC8P31273 242 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RAP1GAPP47736 663 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RAB14P61106 215 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EPS8Q12929 822 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 GRM1Q13255 1194 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ARHGEF6Q15052 776 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TRMT5Q32P41 509 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 PPP6R3Q5H9R7 873 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 C1orf146Q5VVC0 180 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SLF2Q8IX21 1173 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RHOT2Q8IXI1 618 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KLHL7Q8IXQ5 586 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MREGQ8N565 214 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ANKRD42Q8N9B4 389 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BEST2Q8NFU1 509 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RHPN1Q8TCX5 695 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 COX4I2Q96KJ9 171 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TGS1Q96RS0 853 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 OSBPL10Q9BXB5 764 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NT5C3AQ9H0P0 336 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MAGEE1Q9HCI5 957 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SAR1AQ9NR31 198 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 FBXO28Q9NVF7 368 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZNF229Q9UJW7 825 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TRIM33Q9UPN9 1127 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SNX5Q9Y5X3 404 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MAST3O60307 1309 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ATP7AQ04656 1500 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CCDC194A0A1B0GVG4 234 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 USP27XA6NNY8 438 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CFAP99D6REC4 459 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 H3BNX3 289 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ATP9AO75110 1047 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TOMM70O94826 608 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GSNP06396 782 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SLC34A1Q06495 639 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RBL2Q08999 1139 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 HIC1Q14526 733 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CYTH1Q15438 398 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ARMCX5Q6P1M9 558 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SETD3Q86TU7 594 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 CCDC25Q86WR0 208 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TOR1AIP2Q8NFQ8 470 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SEPT1Q8WYJ6 367 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ALKBH8Q96BT7 664 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 LRRC39Q96DD0 335 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CHAMP1Q96JM3 812 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KCNK16Q96T55 309 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KRT12Q99456 494 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 APOL4Q9BPW4 351 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KLHL4Q9C0H6 718 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 EHMT1Q9H9B1 1298 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRPV5Q9NQA5 729 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ANLNQ9NQW6 1124 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PKD2L2Q9NZM6 624 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 LIMA1Q9UHB6 759 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 FBXO9Q9UK97 447 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 BARX2Q9UMQ3 279 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 MRPL11Q9Y3B7 192 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 SQORQ9Y6N5 450 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 VWDEQ8N2E2 1590 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 hCG_2014768A0A024R1R8 64 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RBM47A0AV96 593 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 TMEM191CA6NGB0 347 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 M0QX08 132 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ELL2O00472 640 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 ZBTB43O43298 467 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 BAIAP3O94812 1187 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TMEM191BP0C7N4 346 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PCNAP12004 261 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CCNCP24863 283 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 IL12AP29459 219 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 UBA7P41226 1012 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GNAQP50148 359 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RBM5P52756 815 aaKnown RBP eCLIP2.36□□□□□ -2.03
USP53-202ENST00000450251 PURAQ00577 322 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 LRRC63Q05C16 580 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RESTQ13127 1097 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MAPRE2Q15555 327 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CWF19L2Q2TBE0 894 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 TBC1D10BQ4KMP7 808 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 ZMYM1Q5SVZ6 1142 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TMCO4Q5TGY1 634 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 C16orf89Q6UX73 402 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms