RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 TRIM10Q9UDY6 481 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 PDXKO00764 312 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 RGS20O76081 388 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 FAM13AO94988 1023 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 GCNT3O95395 438 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 CCNE2O96020 404 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 GAP43P17677 238 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 NF2P35240 595 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 UGCGQ16739 394 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 BMT2Q1RMZ1 405 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 ERO1BQ86YB8 467 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 ANKRD13AQ8IZ07 590 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 CCDC42Q96M95 316 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 SH2D3AQ9BRG2 576 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 TBC1D22BQ9NU19 505 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 LOC285556D6RIA3 1793 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 MYH11P35749 1972 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 A0A0G2JLL6 359 aaPredicted RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 TMEM150BA6NC51 233 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 LRRC53A6NM62 1247 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 PPATQ06203 517 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 KCNA1Q09470 495 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 CCDC122Q5T0U0 273 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 LBX2Q6XYB7 198 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 ZNF662Q6ZS27 426 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 RRAGAQ7L523 313 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 PRRT2Q7Z6L0 340 aaPredicted RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 KIAA1328Q86T90 577 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 MYCT1Q8N699 235 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 BAP1Q92560 729 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 IKZF4Q9H2S9 585 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 TAF1DQ9H5J8 278 aaPredicted RBP17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 FAM184BQ9ULE4 1060 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 TFR2Q9UP52 801 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 TELO2Q9Y4R8 837 aa17.71■□□□□ 0.43
AP000253.1-201ENST00000449339 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 SORBS3O60504 671 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 NMT1P30419 496 aaKnown RBP17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 CNTN2Q02246 1040 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 CACNA2D4Q7Z3S7 1137 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 ZC3H15Q8WU90 426 aaKnown RBP17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 EDEM3Q9BZQ6 932 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 ARHGAP20Q9P2F6 1191 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 CALUO43852 315 aaPredicted RBP17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 FSTL1Q12841 308 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 MAEAQ7L5Y9 396 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 NEK9Q8TD19 979 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 ZSWIM4Q9H7M6 989 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 CDC23Q9UJX2 597 aa17.7■□□□□ 0.42
AP000253.1-201ENST00000449339 A0A0G2JMZ2 1700 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 KRT86O43790 486 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 POTEJP0CG39 1038 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 CYP27A1Q02318 531 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 TUBB2AQ13885 445 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 ZC2HC1CQ53FD0 456 aaPredicted RBP17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 KSR1Q8IVT5 923 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 TUBB2BQ9BVA1 445 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 ASTN1O14525 1302 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 LOXHD1Q8IVV2 1947 aa17.69■□□□□ 0.42
AP000253.1-201ENST00000449339 H2AFXP16104 143 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 QARSP47897 775 aaKnown RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 SPA17Q15506 151 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 XRRA1Q6P2D8 792 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 PADI6Q6TGC4 694 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 FRMD5Q7Z6J6 570 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 OPTNQ96CV9 577 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 CRACR2AQ9BSW2 395 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 ASCC2Q9H1I8 757 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 KCND2Q9NZV8 630 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 CEP72Q9P209 647 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 ARMCX3Q9UH62 379 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 RCCD1A6NED2 376 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 NOL4O94818 638 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 LACRTQ9GZZ8 138 aa17.68■□□□□ 0.42
AP000253.1-201ENST00000449339 ZNF263O14978 683 aa17.67■□□□□ 0.42
AP000253.1-201ENST00000449339 EIF3DO15371 548 aaKnown RBP eCLIP17.67■□□□□ 0.42
AP000253.1-201ENST00000449339 HIP1RO75146 1068 aa17.67■□□□□ 0.42
AP000253.1-201ENST00000449339 AKAP3O75969 853 aa17.67■□□□□ 0.42
AP000253.1-201ENST00000449339 NR3C1P04150 777 aa17.67■□□□□ 0.42
AP000253.1-201ENST00000449339 RPL13P26373 211 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms