RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ODF2LQ9ULJ1 636 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 TRIM17Q9Y577 477 aa21.43■■□□□ 1.02
RPS28-202ENST00000449223 DYNC1LI2O43237 492 aaPredicted RBP21.42■■□□□ 1.02
RPS28-202ENST00000449223 CPT1AP50416 773 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 GJA9P57773 515 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 TARBP2Q15633 366 aaKnown RBP21.42■■□□□ 1.02
RPS28-202ENST00000449223 KMT5BQ4FZB7 885 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 UTP14CQ5TAP6 766 aaKnown RBP21.42■■□□□ 1.02
RPS28-202ENST00000449223 PADI6Q6TGC4 694 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 GLG1Q92896 1179 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 REEP2Q9BRK0 252 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 CYP26B1Q9NR63 512 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 NRBP2Q9NSY0 501 aa21.42■■□□□ 1.02
RPS28-202ENST00000449223 BIN1O00499 593 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 ZNF131P52739 623 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 COBLL1Q53SF7 1204 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 ZNF658Q5TYW1 1059 aaPredicted RBP21.41■■□□□ 1.02
RPS28-202ENST00000449223 DYMQ7RTS9 669 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 CCDC47Q96A33 483 aaKnown RBP21.41■■□□□ 1.02
RPS28-202ENST00000449223 AP5M1Q9H0R1 490 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 PDLIM7Q9NR12 457 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 SEPT9Q9UHD8 586 aaPredicted RBP21.41■■□□□ 1.02
RPS28-202ENST00000449223 MYH11P35749 1972 aa21.41■■□□□ 1.02
RPS28-202ENST00000449223 TMEM150BA6NC51 233 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 DGAT1O75907 488 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 GRK4P32298 578 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 NPEPPSP55786 919 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 PSMD2Q13200 908 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 PLCB4Q15147 1175 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 BRDTQ58F21 947 aaPredicted RBP21.4■■□□□ 1.02
RPS28-202ENST00000449223 XKR9Q5GH70 373 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 CT47A1Q5JQC4 288 aaPredicted RBP21.4■■□□□ 1.02
RPS28-202ENST00000449223 PLA2G4FQ68DD2 849 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 GAS2L3Q86XJ1 694 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 CCDC65Q8IXS2 484 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 MLKLQ8NB16 471 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 LENG1Q96BZ8 264 aaPredicted RBP21.4■■□□□ 1.02
RPS28-202ENST00000449223 CEP170P1Q96L14 293 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 CCDC43Q96MW1 224 aaKnown RBP21.4■■□□□ 1.02
RPS28-202ENST00000449223 EXOC1Q9NV70 894 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 ZNF215Q9UL58 517 aaPredicted RBP21.4■■□□□ 1.02
RPS28-202ENST00000449223 PTCH2Q9Y6C5 1203 aa21.4■■□□□ 1.02
RPS28-202ENST00000449223 F2P00734 622 aa21.39■■□□□ 1.02
RPS28-202ENST00000449223 RARBP10826 455 aa21.39■■□□□ 1.02
RPS28-202ENST00000449223 PTPN22Q9Y2R2 807 aa21.39■■□□□ 1.02
RPS28-202ENST00000449223 NPHP3-ACAD11A0A0J9YXS1 232 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 HBP1O60381 514 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 INHAP05111 366 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 KRT18P05783 430 aaKnown RBP21.39■■□□□ 1.01
RPS28-202ENST00000449223 CCND3P30281 292 aaPredicted RBP21.39■■□□□ 1.01
RPS28-202ENST00000449223 COASYQ13057 564 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 MAPK7Q13164 816 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 ANO6Q4KMQ2 910 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 BPIFA3Q9BQP9 254 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 DHX33Q9H6R0 707 aaKnown RBP21.39■■□□□ 1.01
RPS28-202ENST00000449223 OLFML3Q9NRN5 406 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 PANK4Q9NVE7 773 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 SEL1LQ9UBV2 794 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 COL4A3BPQ9Y5P4 624 aa21.39■■□□□ 1.01
RPS28-202ENST00000449223 SYNRGQ9UMZ2 1314 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 FRMPD3Q5JV73 1810 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 COL1A2P08123 1366 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 ZBTB42B2RXF5 422 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 H3BRB1 525 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 MSCO60682 206 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 ADAMTS4O75173 837 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 IDEP14735 1019 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 GAP43P17677 238 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 RFC5P40937 340 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 FSCN1Q16658 493 aaKnown RBP21.38■■□□□ 1.01
RPS28-202ENST00000449223 EXOC8Q8IYI6 725 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 DAW1Q8N136 415 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 MCPH1Q8NEM0 835 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 TUT1Q9H6E5 874 aaKnown RBP21.38■■□□□ 1.01
RPS28-202ENST00000449223 PCDHA2Q9Y5H9 948 aa21.38■■□□□ 1.01
RPS28-202ENST00000449223 KPNA6O60684 536 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 USO1O60763 962 aaKnown RBP21.37■■□□□ 1.01
RPS28-202ENST00000449223 ZNF286BP0CG31 522 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 CST5P28325 142 aaPredicted RBP21.37■■□□□ 1.01
RPS28-202ENST00000449223 RTP1P59025 263 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 GSE1Q14687 1217 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 C11orf57Q6ZUT1 292 aaPredicted RBP21.37■■□□□ 1.01
RPS28-202ENST00000449223 NAT10Q9H0A0 1025 aaKnown RBP21.37■■□□□ 1.01
RPS28-202ENST00000449223 DNAJC25Q9H1X3 360 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 RNPEPQ9H4A4 650 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 PARVGQ9HBI0 331 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 DDX20Q9UHI6 824 aaKnown RBP21.37■■□□□ 1.01
RPS28-202ENST00000449223 DACH1Q9UI36 760 aa21.37■■□□□ 1.01
RPS28-202ENST00000449223 SCN10AQ9Y5Y9 1956 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 FSD2A1L4K1 749 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 GAS2O43903 313 aaKnown RBP21.36■■□□□ 1.01
RPS28-202ENST00000449223 TBCAO75347 108 aaKnown RBP21.36■■□□□ 1.01
RPS28-202ENST00000449223 HSPA8P11142 646 aaKnown RBP21.36■■□□□ 1.01
RPS28-202ENST00000449223 CNGA1P29973 690 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 PPP1R2P41236 205 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 RAD51AP2Q09MP3 1159 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 STK4Q13043 487 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms