RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
POLR1B-209ENST00000448770 SERPINB13Q9UIV8 391 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 EP400Q96L91 3159 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 E7EVH7 732 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 FAM86B1E9PN63 330 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 PGRMC1O00264 195 aaKnown RBP14.92□□□□□ -0.02
POLR1B-209ENST00000448770 MPHOSPH10O00566 681 aaKnown RBP14.92□□□□□ -0.02
POLR1B-209ENST00000448770 FAM86B2P0C5J1 330 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 SCNN1DP51172 638 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 CYP4A11Q02928 519 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 PRR16Q569H4 304 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 C6orf89Q6UWU4 347 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 FRMD5Q7Z6J6 570 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 CYP2W1Q8TAV3 490 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■■■□□ 17.4
POLR1B-209ENST00000448770 TRIM51Q9BSJ1 452 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 PCDHAC2Q9Y5I4 1007 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 ZMYM2Q9UBW7 1377 aa14.92□□□□□ -0.02
POLR1B-209ENST00000448770 CYP3A7-CYP3A51PA0A087WV96 503 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 SFI1A8K8P3 1242 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 RAD21O60216 631 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 FSBPO95073 299 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 CYP3A7P24462 503 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 POU5F1Q01860 360 aaKnown RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 BYSLQ13895 437 aaKnown RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 UBAP2Q5T6F2 1119 aaKnown RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 B4GALNT4Q76KP1 1039 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 RASGEF1CQ8N431 466 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 ATP8B4Q8TF62 1192 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 PBKQ96KB5 322 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 GCNT4Q9P109 453 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 PCDHA1Q9Y5I3 950 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 KRIT1O00522 736 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 TGFB1I1O43294 461 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 GFPT2O94808 682 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 FAM107AO95990 144 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 NR3C1P04150 777 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 CTNNA1P35221 906 aaKnown RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 LRIG3Q6UXM1 1119 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 KSR1Q8IVT5 923 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 SYT2Q8N9I0 419 aaPredicted RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 U2AF1L4Q8WU68 220 aaKnown RBP14.91□□□□□ -0.02
POLR1B-209ENST00000448770 CYFIP2Q96F07 1278 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 BORCS6Q96GS4 357 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 SIPA1L1O43166 1804 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 MYO3BQ8WXR4 1341 aa14.91□□□□□ -0.02
POLR1B-209ENST00000448770 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
POLR1B-209ENST00000448770 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 IFT88Q13099 833 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 CUL1Q13616 776 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 COG2Q14746 738 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 MCTP2Q6DN12 878 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 PEX26Q7Z412 305 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 TMC3Q7Z5M5 1100 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 OTUD6BQ8N6M0 293 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 ERVK-5Q9HDB9 667 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 C6orf229H3BNL8 230 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 EML1O00423 815 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 GALCP54803 685 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 UBLCP1Q8WVY7 318 aaPredicted RBP14.9□□□□□ -0.02
POLR1B-209ENST00000448770 HES6Q96HZ4 224 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
POLR1B-209ENST00000448770 RGL1Q9NZL6 768 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
POLR1B-209ENST00000448770 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 ZBTB39O15060 712 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 BUB1BO60566 1050 aaPredicted RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 MYZAPP0CAP1 466 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 CACNB3P54284 484 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 GPATCH4Q5T3I0 446 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 ADAT2Q7Z6V5 191 aaKnown RBP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 GLYCTKQ8IVS8 523 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 SLC30A5Q8TAD4 765 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 ARHGEF26Q96DR7 871 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 TRIM31Q9BZY9 425 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 GPR88Q9GZN0 384 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 BHMT2Q9H2M3 363 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 EPB41L4BQ9H329 900 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 USP40Q9NVE5 1235 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 TAS2R14Q9NYV8 317 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 BCCIPQ9P287 314 aaKnown RBP eCLIP14.89□□□□□ -0.03
POLR1B-209ENST00000448770 C10orf71Q711Q0 1435 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 A6NNZ2 444 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 PDXKO00764 312 aa14.89□□□□□ -0.03
POLR1B-209ENST00000448770 OPLAHO14841 1288 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms