RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 H3BQ06 376 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 PRPF3O43395 683 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 STAG3L1P0CL83 205 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 IL9P15248 144 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 GJB2P29033 226 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 ZNF76P36508 570 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 ADCY7P51828 1080 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 PLCB4Q15147 1175 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 EP400NLQ6ZTU2 488 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 NIPA1Q7RTP0 329 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 CYP2W1Q8TAV3 490 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 KHSRPQ92945 711 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 P2RX5Q93086 422 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 LLPHQ9BRT6 129 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 RNF26Q9BY78 433 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 CELF4Q9BZC1 486 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 FAM49AQ9H0Q0 323 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 AGO3Q9H9G7 860 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 RC3H2Q9HBD1 1191 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 AGO4Q9HCK5 861 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 BARHL2Q9NY43 387 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 SMC3Q9UQE7 1217 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 KDM3AQ9Y4C1 1321 aa15.58■□□□□ 0.08
PDLIM2-213ENST00000448520 POTEB3A0JP26 581 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 GRM6O15303 877 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 HBP1O60381 514 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 CDKL5O76039 1030 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 HSP90AA1P07900 732 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 LINC00271P0C7V0 271 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 ARP10275 920 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 CD52P31358 61 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 SREBF1P36956 1147 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 CTC1Q2NKJ3 1217 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 ODR4Q5SWX8 454 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 MCTP2Q6DN12 878 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 TYW1BQ6NUM6 668 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 POTEBQ6S5H4 581 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 RTN4RL1Q86UN2 441 aaPredicted RBP15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 NPAS4Q8IUM7 802 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 CMTR2Q8IYT2 770 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 PPP2R3CQ969Q6 453 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 ANO3Q9BYT9 981 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 CLDND1Q9NY35 253 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 PADI3Q9ULW8 664 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 STK36Q9NRP7 1315 aa15.57■□□□□ 0.08
PDLIM2-213ENST00000448520 LOXHD1Q8IVV2 1947 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 IGKV6D-21A0A0A0MT36 114 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 STXBP3O00186 592 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 CLK2P49760 499 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 PAK2Q13177 524 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 PFKFB3Q16875 520 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 FAM160B1Q5W0V3 765 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 MTHFD1LQ6UB35 978 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 CRIPAKQ8N1N5 446 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 C11orf16Q9NQ32 467 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 IGSF9BQ9UPX0 1349 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 EVPLQ92817 2033 aa15.56■□□□□ 0.08
PDLIM2-213ENST00000448520 PRR33A8MZF0 331 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 ADAMTS3O15072 1205 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 DEXIO95424 95 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 MMP1P03956 469 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 SCG2P13521 617 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 KLRC1P26715 233 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 KRT76Q01546 638 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 GUCY1B3Q02153 619 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 ITGB3BPQ13352 177 aaPredicted RBP15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 ABHD15Q6UXT9 468 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 VPS54Q9P1Q0 977 aa15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 MYH9P35579 1960 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-213ENST00000448520 BACH1O14867 736 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 CYP3A4P08684 503 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 LTBRP36941 435 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 TMEM62Q0P6H9 643 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 HYAL1Q12794 435 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 ZNF484Q5JVG2 852 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 MIS18BP1Q6P0N0 1132 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 PLA2G4DQ86XP0 818 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 ADHFE1Q8IWW8 467 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 ATP8B4Q8TF62 1192 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 ZBTB10Q96DT7 871 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 PGBD1Q96JS3 809 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
PDLIM2-213ENST00000448520 COL1A2P08123 1366 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 ZP2Q05996 745 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 NFX1Q12986 1120 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 PDXDC2PQ6P474 469 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 FAM184AQ8NB25 1140 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 SPPL3Q8TCT6 385 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 CCDC12Q8WUD4 166 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 TRAPPC12Q8WVT3 735 aa15.53■□□□□ 0.08
PDLIM2-213ENST00000448520 LINC01599Q8WXQ3 324 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms