RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 AMPD3Q01432 767 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 PRPF4BQ13523 1007 aaKnown RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 RCN2Q14257 317 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 ASIC2Q16515 512 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 PHC3Q8NDX5 983 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 KCNK9Q9NPC2 374 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 CTNNAL1Q9UBT7 734 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 SNX24Q9Y343 169 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 MARF1Q9Y4F3 1742 aaKnown RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 FER1L4A9Z1Z3 1794 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 ADAMTS3O15072 1205 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 DR1Q01658 176 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC6Q16204 474 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 CABP7Q86V35 215 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 KCNH5Q8NCM2 988 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM13CQ8NE31 585 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC15Q8TF66 581 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 NDNQ99608 321 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 ERP44Q9BS26 406 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM60Q9H2L4 133 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 SEMA4AQ9H3S1 761 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 CUEDC2Q9H467 287 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 TCP11L1Q9NUJ3 509 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 DNAAF2Q9NVR5 837 aaKnown RBP10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
SYNPO2-204ENST00000448416 FGGP02679 453 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SCG2P13521 617 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SERPINB4P48594 390 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 LDHAL6AQ6ZMR3 332 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ARHGAP27Q6ZUM4 889 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 OTUD6AQ7L8S5 288 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ADAT2Q7Z6V5 191 aaKnown RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SUPT20HQ8NEM7 779 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 GDAP1Q8TB36 358 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 NAP1L3Q99457 506 aaPredicted RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SLIT3O75094 1523 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ABCB11O95342 1321 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 GM2AP17900 193 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SETDB1Q15047 1291 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 EXOC3L1Q86VI1 746 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 DNAAF5Q86Y56 855 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 RASGEF1CQ8N431 466 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 FBXO25Q8TCJ0 367 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM237Q96Q45 408 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 C7orf25Q9BPX7 421 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 VCX3BQ9H321 246 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 MMADHCQ9H3L0 296 aaPredicted RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ZWILCHQ9H900 591 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 MAGEF1Q9HAY2 307 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 VCX3AQ9NNX9 186 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ZDHHC18Q9NUE0 388 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM120BA0PK00 339 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ATP5HO75947 161 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 NOL4O94818 638 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM163BP0C2L3 166 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SKIP12755 728 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 KCNA3P22001 575 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 GSTT1P30711 240 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 PHKA1P46020 1223 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 CACNA2D1P54289 1103 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 AUHQ13825 339 aaKnown RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 DBN1Q16643 649 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 C1QTNF12Q5T7M4 302 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ACBD5Q5T8D3 534 aaPredicted RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 FOXB2Q5VYV0 432 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC57Q8N9N7 239 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 RASGRP4Q8TDF6 673 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 CNOT7Q9UIV1 285 aaKnown RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC194A0A1B0GVG4 234 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 CETN3O15182 167 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 AFPP02771 609 aaKnown RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 DUPD1Q68J44 220 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 BLIDQ8IZY5 108 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 TTC8Q8TAM2 541 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM136AQ96C01 138 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 ZSCAN10Q96SZ4 725 aaPredicted RBP10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 STOML1Q9UBI4 398 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 HAO1Q9UJM8 370 aa10.19□□□□□ -0.78
SYNPO2-204ENST00000448416 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 BTNL10A8MVZ5 291 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PDLIM1O00151 329 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 POU5F1Q01860 360 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 KLRC3Q07444 240 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 RNF43Q68DV7 783 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 LCORLQ8N3X6 602 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ENDOVQ8N8Q3 282 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 GLG1Q92896 1179 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms