RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 CYP2D6P10635 497 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 PCP11498 1178 aaKnown RBP17.39■□□□□ 0.37
CNOT3-204ENST00000447684 TRAF1Q13077 416 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 ZNF211Q13398 564 aaPredicted RBP17.39■□□□□ 0.37
CNOT3-204ENST00000447684 SEPT2Q15019 361 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
CNOT3-204ENST00000447684 MMTAG2Q9BU76 263 aaKnown RBP17.39■□□□□ 0.37
CNOT3-204ENST00000447684 EPB41L4BQ9H329 900 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 ETNK1Q9HBU6 452 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 KCNK9Q9NPC2 374 aa17.39■□□□□ 0.37
CNOT3-204ENST00000447684 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 H0Y3Z8 333 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 FESP07332 822 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 RNASELQ05823 741 aaKnown RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 COBLL1Q53SF7 1204 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 FBF1Q8TES7 1133 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 DDX12PQ92771 950 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 PGM2Q96G03 612 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 PIDD1Q9HB75 910 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 NKX1-2Q9UD57 310 aaPredicted RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 ZMYND8Q9ULU4 1186 aaPredicted RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 LAD1O00515 517 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 TUBP50607 506 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 RAD23BP54727 409 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 BNIP1Q12981 228 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 FITM2Q8N6M3 262 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
CNOT3-204ENST00000447684 NAGPAQ9UK23 515 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 ABCB11O95342 1321 aa17.38■□□□□ 0.37
CNOT3-204ENST00000447684 PRPHP41219 470 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 CNGA2Q16280 664 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 C6orf118Q5T5N4 469 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 LMNTD2Q8IXW0 634 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 TEKT4Q8WW24 435 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 BLOC1S4Q9NUP1 217 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 RASGRF2O14827 1237 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 MAP3K13O43283 966 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 ADCY1Q08828 1119 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
CNOT3-204ENST00000447684 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
CNOT3-204ENST00000447684 ERP44Q9BS26 406 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 NHSL1Q5SYE7 1610 aa17.37■□□□□ 0.37
CNOT3-204ENST00000447684 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
CNOT3-204ENST00000447684 AGTP01019 485 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 FERP16591 822 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 NAPAP54920 295 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 GRB10Q13322 594 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 GBP7Q8N8V2 638 aaPredicted RBP17.36■□□□□ 0.37
CNOT3-204ENST00000447684 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 U2AF1L4Q8WU68 220 aaKnown RBP17.36■□□□□ 0.37
CNOT3-204ENST00000447684 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 ZHX3Q9H4I2 956 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 SH3GLB2Q9NR46 395 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 ARHGEF3Q9NR81 526 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 AMFRQ9UKV5 643 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 POTEMA6NI47 508 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 FOXO6A8MYZ6 492 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 M0R2N6 131 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 NUDT17P0C025 328 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 SLC9A1P19634 815 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 GBP1P32455 592 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
CNOT3-204ENST00000447684 CWF19L1Q69YN2 538 aaKnown RBP17.36■□□□□ 0.37
CNOT3-204ENST00000447684 TAOK1Q7L7X3 1001 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 SPATA21Q7Z572 469 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 RMDN2Q96LZ7 410 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 UIMC1Q96RL1 719 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 MYH4Q9Y623 1939 aa17.36■□□□□ 0.37
CNOT3-204ENST00000447684 BHMG1C9JSJ3 638 aaPredicted RBP17.35■□□□□ 0.37
CNOT3-204ENST00000447684 FLOT1O75955 427 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 H2AFZP0C0S5 128 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 CREB1P16220 341 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 ABCB4P21439 1286 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 ANO7Q6IWH7 933 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 H2AFVQ71UI9 128 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 CNBD1Q8NA66 436 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 TRIM7Q9C029 511 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 ERVK-5Q9HDB9 667 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
CNOT3-204ENST00000447684 ZNF142P52746 1687 aaPredicted RBP17.35■□□□□ 0.37
CNOT3-204ENST00000447684 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 STARD3NLO95772 234 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNOT3-204ENST00000447684 GALNTL6Q49A17 601 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 DDX23Q9BUQ8 820 aaKnown RBP17.35■□□□□ 0.37
CNOT3-204ENST00000447684 TXLNGYQ9BZA5 131 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 RIC8AQ9NPQ8 531 aa17.35■□□□□ 0.37
CNOT3-204ENST00000447684 GYG1P46976 350 aa17.34■□□□□ 0.37
CNOT3-204ENST00000447684 POLE2P56282 527 aa17.34■□□□□ 0.37
CNOT3-204ENST00000447684 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-204ENST00000447684 LONRF1Q17RB8 773 aa17.34■□□□□ 0.37
CNOT3-204ENST00000447684 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
CNOT3-204ENST00000447684 NT5DC3Q86UY8 548 aa17.34■□□□□ 0.37
CNOT3-204ENST00000447684 LONP2Q86WA8 852 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms