RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 LUC7LQ9NQ29 371 aaKnown RBP12.56□□□□□ -0.4
GNE-203ENST00000447283 COL4A3BPQ9Y5P4 624 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 EBAG9O00559 213 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 NOL4O94818 638 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 CCT5P48643 541 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 BACE1P56817 501 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 GNGT1P63211 74 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 FKBP3Q00688 224 aaKnown RBP12.55□□□□□ -0.4
GNE-203ENST00000447283 MTMR2Q13614 643 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 VGLL4Q14135 290 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 SYDE2Q5VT97 1194 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 ANKRD13CQ8N6S4 541 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
GNE-203ENST00000447283 POTEMA6NI47 508 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 C19orf81C9J6K1 198 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 TLR2O60603 784 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 PLA2G6O60733 806 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 TDP2O95551 362 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ADCY7P51828 1080 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
GNE-203ENST00000447283 NAB2Q15742 525 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
GNE-203ENST00000447283 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 LDHDQ86WU2 507 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 MREGQ8N565 214 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 BCAS4Q8TDM0 211 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ARL8AQ96BM9 186 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 DNAJC19Q96DA6 116 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 WDR46O15213 610 aaKnown RBP12.54□□□□□ -0.4
GNE-203ENST00000447283 BUB1O43683 1085 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
GNE-203ENST00000447283 PAK2Q13177 524 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 IQCKQ8N0W5 287 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 ZNF526Q8TF50 670 aaPredicted RBP12.54□□□□□ -0.4
GNE-203ENST00000447283 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 TANGO6Q9C0B7 1094 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 PRR12Q9ULL5 1215 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
GNE-203ENST00000447283 GNA14O95837 355 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 GLI1P08151 1106 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 COASYQ13057 564 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 LRRC41Q15345 812 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 CDC37Q16543 378 aaPredicted RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 QRICH1Q2TAL8 776 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 CD302Q8IX05 232 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 C1orf131Q8NDD1 294 aaKnown RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 COA7Q96BR5 231 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 MYH7BA7E2Y1 1941 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 PALMO75781 387 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 HYIQ5T013 277 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 MOB2Q70IA6 237 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
GNE-203ENST00000447283 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
GNE-203ENST00000447283 TRAF5O00463 557 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 ZEB2O60315 1214 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 PPP1R11O60927 126 aaPredicted RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 VCAM1P19320 739 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 ECM1Q16610 540 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.4
GNE-203ENST00000447283 AMNQ9BXJ7 453 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 AIPL1Q9NZN9 384 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 PCDHA1Q9Y5I3 950 aa12.52□□□□□ -0.4
GNE-203ENST00000447283 DOCK1Q14185 1865 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms