RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC4-204ENST00000446876 TXKP42681 527 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 CLCN3P51790 818 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 WDR5P61964 334 aaKnown RBP16.67■□□□□ 0.26
HDAC4-204ENST00000446876 LPIN1Q14693 890 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 MTERF2Q49AM1 385 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 PLEKHG4Q58EX7 1191 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 METTL13Q8N6R0 699 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 NRBP2Q9NSY0 501 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 RGL1Q9NZL6 768 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 YBX2Q9Y2T7 364 aaKnown RBP16.67■□□□□ 0.26
HDAC4-204ENST00000446876 TRPV2Q9Y5S1 764 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 H3BQV1 296 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 KCNJ6P48051 423 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 TOB1P50616 345 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-204ENST00000446876 PSMC5P62195 406 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 CYP4A11Q02928 519 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 EPHA7Q15375 998 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 ZNF697Q5TEC3 545 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 KIAA0319LQ8IZA0 1049 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 LRRC71Q8N4P6 559 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 DYDC2Q96IM9 177 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 LXNQ9BS40 222 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 TTYH1Q9H313 450 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-204ENST00000446876 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-204ENST00000446876 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
HDAC4-204ENST00000446876 PCDHA12Q9UN75 941 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
HDAC4-204ENST00000446876 POTEMA6NI47 508 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 VTNP04004 478 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 QARSP47897 775 aaKnown RBP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 IKBKEQ14164 716 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 CTTNQ14247 550 aaKnown RBP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 ANO5Q75V66 913 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 SEPT8Q92599 483 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 TIFAQ96CG3 184 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 SLC9A7Q96T83 725 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 IFIH1Q9BYX4 1025 aaKnown RBP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 NKX2-4Q9H2Z4 354 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 AGO3Q9H9G7 860 aaKnown RBP16.65■□□□□ 0.26
HDAC4-204ENST00000446876 CDHR5Q9HBB8 845 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 GINS2Q9Y248 185 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
HDAC4-204ENST00000446876 ABHD14A-ACY1A0A1B0GW23 586 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 M0QZ92 97 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 CD52P31358 61 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 TARBP2Q15633 366 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 IER5Q5VY09 327 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 EFCAB12Q6NXP0 572 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 CEP89Q96ST8 783 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 EIF2AK1Q9BQI3 630 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 NIFKQ9BYG3 293 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
HDAC4-204ENST00000446876 SUGCTQ9HAC7 445 aa16.64■□□□□ 0.25
HDAC4-204ENST00000446876 ZBTB39O15060 712 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 TRAPPC10P48553 1259 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 NPEPPSP55786 919 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 DRP2Q13474 957 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 RAB30Q15771 203 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 FAM117BQ6P1L5 589 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 TSHZ1Q6ZSZ6 1077 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 TPH2Q8IWU9 490 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 BMP2KQ9NSY1 1161 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-204ENST00000446876 MTMR10Q9NXD2 777 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 MSRAQ9UJ68 235 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 AKT3Q9Y243 479 aa16.63■□□□□ 0.25
HDAC4-204ENST00000446876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-204ENST00000446876 MAGEB2O15479 319 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 SLITRK3O94933 977 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 ARHGEF15O94989 841 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 RPLP2P05387 115 aaKnown RBP16.62■□□□□ 0.25
HDAC4-204ENST00000446876 TECP42680 631 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 ORC2Q13416 577 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-204ENST00000446876 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 NME8Q8N427 588 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 TMEM40Q8WWA1 233 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms