RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 STRBPQ96SI9 672 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 ABCA5Q8WWZ7 1642 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PDE5AO76074 875 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 FAM153BP0C7A2 387 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 STMN1P16949 149 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ATF7P17544 494 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 FAM153CQ494X1 144 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ZNF790Q6PG37 636 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 RXFP1Q9HBX9 757 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 FAM153AQ9UHL3 310 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 NCF2P19878 526 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 BSPRYQ5W0U4 402 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMG1-202ENST00000446231 UTP6Q9NYH9 597 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 TMC4Q7Z404 712 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 KCNA4P22459 653 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ALX1Q15699 326 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 BBS9Q3SYG4 887 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 TAB3Q8N5C8 712 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 SYN2Q92777 582 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 CFAP36Q96G28 342 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 KDM1AO60341 852 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 NSFP46459 744 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 TRMT1LQ7Z2T5 733 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 ITFG2Q969R8 447 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 FAM89AQ96GI7 184 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 SERPINI1Q99574 410 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 CUL7Q14999 1698 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 HP1BP3Q5SSJ5 553 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PABPC3Q9H361 631 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 ATP10BO94823 1461 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PRPF6O94906 941 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 ALDH18A1P54886 795 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 PTPAQ15257 358 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 DDI1Q8WTU0 396 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ZSWIM5Q9P217 1185 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 STK36Q9NRP7 1315 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ARHGEF35A5YM69 484 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 RFC5P40937 340 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 ARL4CP56559 192 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PFDN4Q9NQP4 134 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 IPO5O00410 1097 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 MAPK4P31152 587 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 STAT2P52630 851 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PDZD8Q8NEN9 1154 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 PRCCQ92733 491 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 CCT7Q99832 543 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 CDC27P30260 824 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 HERVK_113P62684 666 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 NUDCD3Q8IVD9 361 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 STRNO43815 780 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 TOM1O60784 492 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 APOEP02649 317 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 KAZNQ674X7 775 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 RPS6KA2Q15349 733 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
SMG1-202ENST00000446231 DMAP1Q9NPF5 467 aaPredicted RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
SMG1-202ENST00000446231 BCAMP50895 628 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CENPUQ71F23 418 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 MREGQ8N565 214 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 UBN1Q9NPG3 1134 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 BTBD7Q9P203 1132 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 SASH1O94885 1247 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CDC25CP30307 473 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 MYL7Q01449 175 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ZNF496Q96IT1 587 aaPredicted RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 TNKSO95271 1327 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 MCF2LO15068 1137 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 TNFRSF8P28908 595 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PPP2R5CQ13362 524 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PUS7LQ9H0K6 701 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 GDF3Q9NR23 364 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PRKAB2O43741 272 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ATP6V1B1P15313 513 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 TFAP4Q01664 338 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 BTKQ06187 659 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CAPN9O14815 690 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 GGPS1O95749 300 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 LRRC36Q1X8D7 754 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PARD3BQ8TEW8 1205 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 MAP3K14Q99558 947 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 IMPG2Q9BZV3 1241 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 FOXP2O15409 715 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 NR2F2P24468 414 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 RARS2Q5T160 578 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 CREG2Q8IUH2 290 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 EIF2AQ9BY44 585 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms