RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PASD1Q8IV76 773 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZZZ3Q8IYH5 903 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 PRPF38AQ8NAV1 312 aaKnown RBP6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF526Q8TF50 670 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZCCHC14Q8WYQ9 949 aaKnown RBP6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 MS4A5Q9H3V2 200 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 UCKL1Q9NWZ5 548 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 ARHGAP20Q9P2F6 1191 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 LSP1P33241 339 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 ECE1P42892 770 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 AFF3P51826 1226 aaKnown RBP6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 ADCY1Q08828 1119 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 PKN1Q16512 942 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 C11orf74Q86VG3 221 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 CLRN3Q8NCR9 226 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 HIPK4Q8NE63 616 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 WDR66Q8TBY9 1149 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 BTBD2Q9BX70 525 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 IRF2BPLQ9H1B7 796 aa6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 DDX56Q9NY93 547 aaKnown RBP6.03□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 UBA6A0AVT1 1052 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 K7ESF4 209 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 ULK1O75385 1050 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 CD40P25942 277 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 GLRBP48167 497 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 SESN3P58005 492 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 IL13RA1P78552 427 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 MYBPC3Q14896 1274 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 DDB1Q16531 1140 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 BROXQ5VW32 411 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 KANSL1Q7Z3B3 1105 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 NECAB2Q7Z6G3 386 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 RASSF3Q86WH2 238 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 STPG3Q8N7X2 389 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 LINC01356Q8N9X3 169 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 ATL2Q8NHH9 583 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 STAG1Q8WVM7 1258 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 RTF1Q92541 710 aaKnown RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 E2F7Q96AV8 911 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 ZNF496Q96IT1 587 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 MAML3Q96JK9 1138 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 TACO1Q9BSH4 297 aaKnown RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 ZDHHC5Q9C0B5 715 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 OR10A5Q9H207 317 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 SEMA4AQ9H3S1 761 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 VTA1Q9NP79 307 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 USP36Q9P275 1121 aaKnown RBP6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 CHPF2Q9P2E5 772 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 CROTQ9UKG9 612 aa6.02□□□□□ -1.45
HMGB1P48-201ENST00000446155 A0A1B0GTL3 188 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 LCHNA4D1U4 455 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 KLHL18O94889 574 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 S100BP04271 92 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 CFPP27918 469 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 TMPRSS15P98073 1019 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 HSP90AB2PQ58FF8 381 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 CXXC5Q7LFL8 322 aaKnown RBP6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 TMEM151BQ8IW70 566 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 COG1Q8WTW3 980 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 ERCC4Q92889 916 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 NTMQ9P121 344 aa6.01□□□□□ -1.45
HMGB1P48-201ENST00000446155 DBX1A6NMT0 343 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 ELL2O00472 640 aaPredicted RBP6□□□□□ -1.45
HMGB1P48-201ENST00000446155 NUAK1O60285 661 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 CYP7B1O75881 506 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 PRKD3O94806 890 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 IL13P35225 146 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 RGS3P49796 1198 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 SLC6A3Q01959 620 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 ROM1Q03395 351 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 CIAPIN1Q6FI81 312 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 TTLL7Q6ZT98 887 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 PHYKPLQ8IUZ5 450 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 ADGRG2Q8IZP9 1017 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 CARFQ8N187 725 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 YTHDC1Q96MU7 727 aaKnown RBP6□□□□□ -1.45
HMGB1P48-201ENST00000446155 TRIM8Q9BZR9 551 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 TOPORSQ9NS56 1045 aaPredicted RBP6□□□□□ -1.45
HMGB1P48-201ENST00000446155 SLC52A1Q9NWF4 448 aa6□□□□□ -1.45
HMGB1P48-201ENST00000446155 FBXO21O94952 628 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 ERVK-21P61565 698 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 PDCD1Q15116 288 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 ZBTB41Q5SVQ8 909 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 SLFN12LQ6IEE8 588 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 DPP8Q6V1X1 898 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 HDGFL2Q7Z4V5 671 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 CXorf67Q86X51 503 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 LRRC56Q8IYG6 542 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 C7orf31Q8N865 590 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 TOX2Q96NM4 488 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 MYL10Q9BUA6 226 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 PITHD1Q9GZP4 211 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 HAPLN2Q9GZV7 340 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 PUS7LQ9H0K6 701 aaKnown RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 POFUT1Q9H488 388 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 TYW1Q9NV66 732 aaKnown RBP5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 SLC5A4Q9NY91 659 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms