RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 OATP04181 439 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 TAP1Q03518 808 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 NME8Q8N427 588 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 BANK1Q8NDB2 785 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 FAM20AQ96MK3 541 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 PPP1R16BQ96T49 567 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
SEC22C-208ENST00000445388 NRBP2Q9NSY0 501 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 VAV3Q9UKW4 847 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 COL6A3P12111 3177 aa17.25■□□□□ 0.35
SEC22C-208ENST00000445388 CDH23Q9H251 3354 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 RFXAPO00287 272 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 UPP2O95045 317 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 CD52P31358 61 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 ADGRE1Q14246 886 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 METTL13Q8N6R0 699 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 APBB2Q92870 758 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 FAM167AQ96KS9 214 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 TBC1D32Q96NH3 1257 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 RAD9AQ99638 391 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
SEC22C-208ENST00000445388 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
SEC22C-208ENST00000445388 MYH9P35579 1960 aaKnown RBP17.24■□□□□ 0.35
SEC22C-208ENST00000445388 WDR81Q562E7 1941 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 EPOPA6NHQ4 379 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 M0QZ92 97 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 TBX3O15119 743 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 ST18O60284 1047 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 MARCH6O60337 910 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 VTNP04004 478 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
SEC22C-208ENST00000445388 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 LRRC71Q8N4P6 559 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 MAFAQ8NHW3 353 aaPredicted RBP17.23■□□□□ 0.35
SEC22C-208ENST00000445388 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
SEC22C-208ENST00000445388 ENPP3O14638 875 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 CLCN3P51790 818 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
SEC22C-208ENST00000445388 TARBP2Q15633 366 aaKnown RBP17.22■□□□□ 0.35
SEC22C-208ENST00000445388 TMEM266Q2M3C6 531 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 EFCAB12Q6NXP0 572 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 RTN4RL1Q86UN2 441 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-208ENST00000445388 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 TMEM40Q8WWA1 233 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 GAS2L1Q99501 681 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-208ENST00000445388 SEPT9Q9UHD8 586 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-208ENST00000445388 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
SEC22C-208ENST00000445388 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 MAGEB2O15479 319 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 BAG4O95429 457 aaKnown RBP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 IGFBP4P22692 258 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 SAFBQ15424 915 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 XKR3Q5GH77 459 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 LINC01465Q8N7H1 131 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 ARNTL2Q8WYA1 636 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 CEP89Q96ST8 783 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 NIFKQ9BYG3 293 aaKnown RBP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 SUGCTQ9HAC7 445 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 WRAP73Q9P2S5 460 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
SEC22C-208ENST00000445388 SQORQ9Y6N5 450 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 EVPLQ92817 2033 aa17.21■□□□□ 0.35
SEC22C-208ENST00000445388 LINC01553A4QN01 128 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 GPR32O75388 356 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 PSMC5P62195 406 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 HTRA4P83105 476 aaPredicted RBP17.2■□□□□ 0.34
SEC22C-208ENST00000445388 EPHA7Q15375 998 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 CALCRLQ16602 461 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 ANO5Q75V66 913 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 SLFN12Q8IYM2 578 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 USP38Q8NB14 1042 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 PPM1EQ8WY54 764 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 OSMRQ99650 979 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 RGL1Q9NZL6 768 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 INSL6Q9Y581 213 aa17.2■□□□□ 0.34
SEC22C-208ENST00000445388 LOXHD1Q8IVV2 1947 aa17.19■□□□□ 0.34
SEC22C-208ENST00000445388 NEMFO60524 1076 aa17.19■□□□□ 0.34
SEC22C-208ENST00000445388 P4HBP07237 508 aaKnown RBP17.19■□□□□ 0.34
SEC22C-208ENST00000445388 MCM7P33993 719 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms