RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 CHD7Q9P2D1 2997 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 LINC01553A4QN01 128 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 CHMP2AO43633 222 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 SLC37A4O43826 429 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 JAK2O60674 1132 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 MMP1P03956 469 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 ERVK-21P61565 698 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 ST3GAL1Q11201 340 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 TRIM29Q14134 588 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 ARNTL2Q8WYA1 636 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 GJA10Q969M2 543 aa21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 AGO3Q9H9G7 860 aaKnown RBP21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 MYH9P35579 1960 aaKnown RBP21.22■□□□□ 0.99
ATPAF2-201ENST00000444058 SIP14410 1827 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 ENPP3O14638 875 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 CCNT1O60563 726 aaKnown RBP21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 DTNBO60941 627 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 IGFBP4P22692 258 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 PRKCEQ02156 737 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 TMEM62Q0P6H9 643 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 PPP2R5CQ13362 524 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 FAM117BQ6P1L5 589 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 TGS1Q96RS0 853 aaKnown RBP21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 SH2B1Q9NRF2 756 aaPredicted RBP21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 COL4A6Q14031 1691 aa21.21■□□□□ 0.99
ATPAF2-201ENST00000444058 TMOD1P28289 359 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 CD52P31358 61 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 NR5A1Q13285 461 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 UGCGQ16739 394 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 XKR3Q5GH77 459 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 EARS2Q5JPH6 523 aaKnown RBP21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 ODR4Q5SWX8 454 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 KRT40Q6A162 431 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 YME1L1Q96TA2 773 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 NIFKQ9BYG3 293 aaKnown RBP21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 CERS4Q9HA82 394 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 VAV3Q9UKW4 847 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 PADI3Q9ULW8 664 aa21.2■□□□□ 0.98
ATPAF2-201ENST00000444058 EPOPA6NHQ4 379 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 GTPBP6O43824 516 aaPredicted RBP21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 CRYBB1P53674 252 aaPredicted RBP21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 PAK2Q13177 524 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 TARBP2Q15633 366 aaKnown RBP21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 DIS3L2Q8IYB7 885 aaKnown RBP21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 SLFN12Q8IYM2 578 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 METTL13Q8N6R0 699 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 LINC01465Q8N7H1 131 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 SAMD11Q96NU1 681 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 LMCD1Q9NZU5 365 aa21.19■□□□□ 0.98
ATPAF2-201ENST00000444058 BTBD18B2RXH4 712 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 DKC1O60832 514 aaKnown RBP eCLIP21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 PSMC5P62195 406 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 RABEP1Q15276 862 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 TRMT1LQ7Z2T5 733 aaKnown RBP21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 HAS1Q92839 578 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 MAP7D2Q96T17 732 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 TSPYL2Q9H2G4 693 aaPredicted RBP21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 MTCH2Q9Y6C9 303 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 EYSQ5T1H1 3165 aa21.18■□□□□ 0.98
ATPAF2-201ENST00000444058 RBAK-RBAKDNI3L0D1 243 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 RFXAPO00287 272 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 GPR182O15218 404 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 LPXNO60711 386 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 GPR32O75388 356 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 RPS6KA5O75582 802 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 UPP2O95045 317 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 STBD1O95210 358 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 BAG4O95429 457 aaKnown RBP21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 CDC42EP1Q00587 391 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 TBC1D8BQ0IIM8 1120 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 GRB10Q13322 594 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 EFCAB12Q6NXP0 572 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 CCDC83Q8IWF9 413 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 CRIPAKQ8N1N5 446 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 SUGCTQ9HAC7 445 aa21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 UPF2Q9HAU5 1272 aaKnown RBP21.17■□□□□ 0.98
ATPAF2-201ENST00000444058 WDR81Q562E7 1941 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 FAM205CA6NFA0 338 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 MARCH6O60337 910 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 QARSP47897 775 aaKnown RBP21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 SAFBQ15424 915 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 SPRED2Q7Z698 418 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 RTN4RL1Q86UN2 441 aaPredicted RBP21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 TMEM40Q8WWA1 233 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 CDHR5Q9HBB8 845 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 RC3H2Q9HBD1 1191 aaKnown RBP21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 ERVK-5Q9HDB9 667 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 GINS2Q9Y248 185 aa21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 NOC2LQ9Y3T9 749 aaKnown RBP21.16■□□□□ 0.98
ATPAF2-201ENST00000444058 UNC80Q8N2C7 3258 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 EML1O00423 815 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 EPHA7Q15375 998 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 KIZQ2M2Z5 673 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 LINC01599Q8WXQ3 324 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 CEP89Q96ST8 783 aa21.15■□□□□ 0.98
ATPAF2-201ENST00000444058 TMX1Q9H3N1 280 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms