RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TBC1D8BQ0IIM8 1120 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 RESTQ13127 1097 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
HDAC6-211ENST00000443563 RUFY4Q6ZNE9 571 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 DEFB128Q7Z7B8 93 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 TPH2Q8IWU9 490 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 TRAPPC12Q8WVT3 735 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 WNT8BQ93098 351 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
HDAC6-211ENST00000443563 HSD17B14Q9BPX1 270 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-211ENST00000443563 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDAC6-211ENST00000443563 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 RGL1Q9NZL6 768 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 LRWD1Q9UFC0 647 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 GAS2O43903 313 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 EFCAB14O75071 495 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 C22orf31O95567 290 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CXCL10P02778 98 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CTSHP09668 335 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 ACRP10323 421 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 RPA1P27694 616 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 YWHABP31946 246 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 MRPS6P82932 125 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CDC42EP1Q00587 391 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 SHHQ15465 462 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 MTERF2Q49AM1 385 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CEP170P1Q96L14 293 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 MAP7D2Q96T17 732 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.475e-7■■■□□ 15.3
HDAC6-211ENST00000443563 FAM49AQ9H0Q0 323 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-211ENST00000443563 CYP26B1Q9NR63 512 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 ANKEF1Q9NU02 776 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 SQORQ9Y6N5 450 aa12.12□□□□□ -0.47
HDAC6-211ENST00000443563 BAIAP3O94812 1187 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 STBD1O95210 358 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-211ENST00000443563 RFC5P40937 340 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 EPHB4P54760 987 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 LRIT3Q3SXY7 679 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
HDAC6-211ENST00000443563 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 KRT79Q5XKE5 535 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 ANO5Q75V66 913 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 USP38Q8NB14 1042 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 SLC7A3Q8WY07 619 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 APBB2Q92870 758 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 AK8Q96MA6 479 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 AKT3Q9Y243 479 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 TRPV2Q9Y5S1 764 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 SIP14410 1827 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
HDAC6-211ENST00000443563 NBNO60934 754 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 POLGP54098 1239 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 MGAT3Q09327 533 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 IKBKEQ14164 716 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 C9orf50Q5SZB4 431 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 C16orf59Q7L2K0 433 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 SEPT8Q92599 483 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 CELF4Q9BZC1 486 aaKnown RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 SUGCTQ9HAC7 445 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 WRAP73Q9P2S5 460 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-211ENST00000443563 CDY2AQ9Y6F7 541 aa12.1□□□□□ -0.47
HDAC6-211ENST00000443563 IGKV6-21A0A0C4DH24 114 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 SLC26A4O43511 780 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 MED24O75448 989 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 CHRNA1P02708 482 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 SPATA31C1P0DKV0 1188 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms