RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
USP1-203ENST00000442679 BMP8BP34820 402 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 RFC2P35250 354 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 EPHB4P54760 987 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 TARBP2Q15633 366 aaKnown RBP13.8□□□□□ -0.2
USP1-203ENST00000442679 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 LRRC8DQ7L1W4 858 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 OTUD6AQ7L8S5 288 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 METTL13Q8N6R0 699 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
USP1-203ENST00000442679 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
USP1-203ENST00000442679 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 MED24O75448 989 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 CTSHP09668 335 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 RPA1P27694 616 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 NPEPPSP55786 919 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 PTPAQ15257 358 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 HAUS3Q68CZ6 603 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 EFCAB12Q6NXP0 572 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 RPUSD2Q8IZ73 545 aaKnown RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 KIAA0319LQ8IZA0 1049 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 NME8Q8N427 588 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 PRO3102Q9H379 93 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 IL23AQ9NPF7 189 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 CYP26B1Q9NR63 512 aa13.79□□□□□ -0.2
USP1-203ENST00000442679 TFIP11Q9UBB9 837 aaKnown RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
USP1-203ENST00000442679 A0A087WWV3 80 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 PP2D1A8MPX8 630 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 PARNO95453 639 aaKnown RBP13.78□□□□□ -0.2
USP1-203ENST00000442679 BRD1O95696 1058 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 ACRP10323 421 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP1-203ENST00000442679 TMOD1P28289 359 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 CDC25AP30304 524 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
USP1-203ENST00000442679 XKR9Q5GH70 373 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
USP1-203ENST00000442679 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 NACC1Q96RE7 527 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 SUGCTQ9HAC7 445 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
USP1-203ENST00000442679 CEP290O15078 2479 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 MAFO75444 373 aaPredicted RBP13.77□□□□□ -0.21
USP1-203ENST00000442679 CHRNA1P02708 482 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 MUTP22033 750 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
USP1-203ENST00000442679 CLCN3P51790 818 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.21
USP1-203ENST00000442679 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 GPNMBQ14956 572 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 ECM1Q16610 540 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 IER5Q5VY09 327 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 ZNF365Q70YC5 407 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 LRRC71Q8N4P6 559 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 AK8Q96MA6 479 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
USP1-203ENST00000442679 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.21
USP1-203ENST00000442679 KIAA1024Q9UPX6 916 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
USP1-203ENST00000442679 IGKV6-21A0A0C4DH24 114 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 M0QZ92 97 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 NBNO60934 754 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 FGBP02675 491 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 PFKMP08237 780 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 RFC5P40937 340 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 DNM2P50570 870 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 POLGP54098 1239 aaPredicted RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 GRIN1Q05586 938 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 MGAT3Q09327 533 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 MBTPS1Q14703 1052 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 STK38Q15208 465 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 SHHQ15465 462 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms