RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 CCDC60Q8IWA6 550 aaPredicted RBP9.51□□□□□ -0.89
TOP3B-209ENST00000442653 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 KIAA0319LQ8IZA0 1049 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
TOP3B-209ENST00000442653 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 GINS2Q9Y248 185 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 NOC2LQ9Y3T9 749 aaKnown RBP9.51□□□□□ -0.89
TOP3B-209ENST00000442653 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
TOP3B-209ENST00000442653 PLXNA4Q9HCM2 1894 aa9.51□□□□□ -0.89
TOP3B-209ENST00000442653 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 BACH1O14867 736 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 DHX15O43143 795 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ZBTB43O43298 467 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 EYA4O95677 639 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 FOSP01100 380 aaPredicted RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 STAG3L1P0CL83 205 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ATP4AP20648 1035 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 CDC27P30260 824 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 NRIP1P48552 1158 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 SARSP49591 514 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 NDUFV1P49821 464 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 SLC26A2P50443 739 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 NFX1Q12986 1120 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 NAALADL2Q58DX5 795 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 HERC4Q5GLZ8 1057 aaPredicted RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 FAM102BQ5T8I3 360 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ABHD15Q6UXT9 468 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 RBM23Q86U06 439 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 NME8Q8N427 588 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 EFHBQ8N7U6 833 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 SMRP1Q8NCR6 262 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 VN1R2Q8NFZ6 395 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 POF1BQ8WVV4 589 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 FBXL18Q96ME1 805 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 POP1Q99575 1024 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ERVK-5Q9HDB9 667 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 BARHL2Q9NY43 387 aa9.5□□□□□ -0.89
TOP3B-209ENST00000442653 BARX2Q9UMQ3 279 aaPredicted RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 ZFHX2Q9C0A1 2572 aaPredicted RBP9.5□□□□□ -0.89
TOP3B-209ENST00000442653 MYO15AQ9UKN7 3530 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 FNDC1Q4ZHG4 1894 aaPredicted RBP9.49□□□□□ -0.89
TOP3B-209ENST00000442653 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 C22orf31O95567 290 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 NHLH1Q02575 133 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 COASYQ13057 564 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 KIZQ2M2Z5 673 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 JAKMIP3Q5VZ66 844 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 SYNE3Q6ZMZ3 975 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
TOP3B-209ENST00000442653 NIPA1Q7RTP0 329 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
TOP3B-209ENST00000442653 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 PPP1R16BQ96T49 567 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 ADAM2Q99965 735 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
TOP3B-209ENST00000442653 LRFN2Q9ULH4 789 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 ST3GAL5Q9UNP4 418 aa9.49□□□□□ -0.89
TOP3B-209ENST00000442653 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
TOP3B-209ENST00000442653 EVPLQ92817 2033 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 KLF18A0A0U1RQI7 1052 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 DENND3A2RUS2 1198 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 GOLGA8BA8MQT2 603 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 C9IYK1 514 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 IPO5O00410 1097 aaKnown RBP9.48□□□□□ -0.89
TOP3B-209ENST00000442653 PER2O15055 1255 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 HBP1O60381 514 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 FGFR1P11362 822 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 ZNF76P36508 570 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 FAM160B1Q5W0V3 765 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 SWSAP1Q6NVH7 229 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 SLC24A5Q71RS6 500 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 PLA2G4DQ86XP0 818 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 OSMRQ99650 979 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 TLE6Q9H808 572 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 ZNF302Q9NR11 478 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 RGS18Q9NS28 235 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 COL1A2P08123 1366 aa9.48□□□□□ -0.89
TOP3B-209ENST00000442653 LOC730098B7Z3J9 87 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms