RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 USP17L11C9JVI0 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L18D6R9N7 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L22D6RA61 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L17D6RBQ6 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L19D6RCP7 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L20D6RJB6 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 KIF3CO14782 793 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 PLA2G4BP0C869 781 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L24Q0WX57 530 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 PARP9Q8IXQ6 854 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 GIMAP7Q8NHV1 300 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
MCF2L-218ENST00000442625 COL5A3P25940 1745 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-218ENST00000442625 TLDC2A0PJX2 215 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 KRT18P05783 430 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 RPSAP08865 295 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 SCTRP47872 440 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 NT5C2P49902 561 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 PRPF4BQ13523 1007 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 ALKBH5Q6P6C2 394 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 TBC1D31Q96DN5 1066 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 EDEM3Q9BZQ6 932 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 OSGEPQ9NPF4 335 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 LUC7LQ9NQ29 371 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 BMP2KQ9NSY1 1161 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 EMILIN3Q9NT22 766 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 GGT7Q9UJ14 662 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 PCDHA2Q9Y5H9 948 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 PGRMC1O00264 195 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 CAND2O75155 1236 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 TCERG1LQ5VWI1 586 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 GOPCQ9HD26 462 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 AIPL1Q9NZN9 384 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 NAGPAQ9UK23 515 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 MEIS1O00470 390 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 COQ9O75208 318 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 SMARCA1P28370 1054 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-218ENST00000442625 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 TMC3Q7Z5M5 1100 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 DAAM2Q86T65 1068 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 CACNA2D3Q8IZS8 1091 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 TPCN2Q8NHX9 752 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 KCTD10Q9H3F6 313 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 MCM8Q9UJA3 840 aa15.37■□□□□ 0.05
MCF2L-218ENST00000442625 MYH7BA7E2Y1 1941 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 PPP1R12BO60237 982 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 NR2F2P24468 414 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 IFFO1Q0D2I5 559 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 SNCBQ16143 134 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 AADACL2Q6P093 401 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 CCDC65Q8IXS2 484 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 GLG1Q92896 1179 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 ODF2LQ9ULJ1 636 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 ZBTB48P10074 688 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 UCHL3P15374 230 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 LRIG3Q6UXM1 1119 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 CUL5Q93034 780 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 LRRC45Q96CN5 670 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 NUCKS1Q9H1E3 243 aaKnown RBP15.36■□□□□ 0.05
MCF2L-218ENST00000442625 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
MCF2L-218ENST00000442625 MED24O75448 989 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 FGGP02679 453 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CYP11B2P19099 503 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 ABCB4P21439 1286 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 ZNF543Q08ER8 600 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CUL1Q13616 776 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 PREPLQ4J6C6 727 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CNBD1Q8NA66 436 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CEP63Q96MT8 703 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 SELENOSQ9BQE4 189 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CCNL1Q9UK58 526 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-218ENST00000442625 F8VZ95 297 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 CASP4P49662 377 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
MCF2L-218ENST00000442625 PSMC6P62333 389 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 ARSHQ5FYA8 562 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms