RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TRIP13Q15645 432 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 NPY5RQ15761 445 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 HHATQ5VTY9 493 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 HGSNATQ68CP4 663 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 GJB7Q6PEY0 223 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 ZNF572Q7Z3I7 529 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 ARHGAP22Q7Z5H3 698 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 CCDC84Q86UT8 332 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 PHC3Q8NDX5 983 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 RUBCNQ92622 972 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 ERP27Q96DN0 273 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 DYDC2Q96IM9 177 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 FGD4Q96M96 766 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 RAB17Q9H0T7 212 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 COL22A1Q8NFW1 1626 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 RGPD3A6NKT7 1758 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-214ENST00000441542 RGPD4Q7Z3J3 1758 aa8.15□□□□□ -1.1
HDAC9-214ENST00000441542 TMEM120BA0PK00 339 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 CETN3O15182 167 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 PRPF3O43395 683 aaKnown RBP8.15□□□□□ -1.11
HDAC9-214ENST00000441542 RNF8O76064 485 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 PAX3P23760 479 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 EPHB2P29323 1055 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 STX2P32856 288 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 KCNJ1P48048 391 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 PDE6CP51160 858 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 ZNF131P52739 623 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 DR1Q01658 176 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 ROR2Q01974 943 aaKnown RBP8.15□□□□□ -1.11
HDAC9-214ENST00000441542 PTK2Q05397 1052 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 KCNMA1Q12791 1236 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 ZNF662Q6ZS27 426 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 SPATA21Q7Z572 469 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 P3H4Q92791 437 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 ORAI2Q96SN7 254 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.11
HDAC9-214ENST00000441542 RNF41Q9H4P4 317 aaPredicted RBP8.15□□□□□ -1.11
HDAC9-214ENST00000441542 OSGEPQ9NPF4 335 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 RGL1Q9NZL6 768 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 RNF14Q9UBS8 474 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 DAAM1Q9Y4D1 1078 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 SLIT1O75093 1534 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 ITSN1Q15811 1721 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 AFF2P51816 1311 aa8.15□□□□□ -1.11
HDAC9-214ENST00000441542 CCDC169A6NNP5 214 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 CBX6O95503 412 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SERPING1P05155 500 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 FESP07332 822 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 CYP2D6P10635 497 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 KLC1Q07866 573 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SH3RF3Q8TEJ3 882 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 GBP5Q96PP8 586 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TRIM7Q9C029 511 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 KLHL14Q9P2G3 628 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ATP6V0A2Q9Y487 856 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 COL24A1Q17RW2 1714 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 DIP2AQ14689 1571 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ANKRD33BA6NCL7 494 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TSPY2A6NKD2 308 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 PHKG2P15735 406 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 DEUP1Q05D60 604 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ITIH4Q14624 930 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 PDCD2Q16342 344 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TSNAXIP1Q2TAA8 658 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ALKBH5Q6P6C2 394 aaKnown RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 BARGINQ6ZT62 677 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TMTC3Q6ZXV5 915 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 DNAJC9Q8WXX5 260 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SPOCK2Q92563 424 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TSG101Q99816 390 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 GORASP1Q9BQQ3 440 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 PCMTD2Q9NV79 361 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 LNPEPQ9UIQ6 1025 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 MON2Q7Z3U7 1717 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 A0A1W2PQJ5 194 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 A6NHS1 94 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 MYMKA6NI61 221 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 USP17L21D6R901 530 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SPAG7O75391 227 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 CIAO1O76071 339 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 GSTA1P08263 222 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SLC9A1P19634 815 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SP100P23497 879 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 SLC18A3Q16572 532 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ZC2HC1CQ53FD0 456 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 HP1BP3Q5SSJ5 553 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms