RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 MX1P20591 662 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 FGFR2P21802 821 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ADORA2AP29274 412 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ADORA1P30542 326 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 CDK7P50613 346 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 TIMM10P62072 90 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 TAP1Q03518 808 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ZP2Q05996 745 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 COL9A2Q14055 689 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ACAP1Q15027 740 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 C8orf34Q49A92 452 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 TTC22Q5TAA0 569 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 CAPN12Q6ZSI9 719 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ASCL5Q7RTU5 278 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 DGLUCYQ7Z3D6 616 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ADHFE1Q8IWW8 467 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 CLASRPQ8N2M8 674 aaKnown RBP5.72□□□□□ -1.49
PTPN4-206ENST00000441089 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 EDAQ92838 391 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 RBSNQ9H1K0 784 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 GPR108Q9NPR9 543 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 DBNLQ9UJU6 430 aaKnown RBP5.72□□□□□ -1.49
PTPN4-206ENST00000441089 ZZEF1O43149 2961 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 MROH5Q6ZUA9 1318 aa5.72□□□□□ -1.49
PTPN4-206ENST00000441089 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.5
PTPN4-206ENST00000441089 RFX7Q2KHR2 1363 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 TET1Q8NFU7 2136 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 SCN5AQ14524 2016 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 A0A1B0GUL7 405 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 TMEM221A6NGB7 291 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 EPOPA6NHQ4 379 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 M0R296 226 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 PDE8BO95263 885 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 PGK1P00558 417 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 LDHBP07195 334 aaKnown RBP5.71□□□□□ -1.5
PTPN4-206ENST00000441089 PFKMP08237 780 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 CYP2C18P33260 490 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 ZAP70P43403 619 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 METTL24Q5JXM2 366 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 LBX2Q6XYB7 198 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 CCDC82Q8N4S0 544 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 PCSK9Q8NBP7 692 aaKnown RBP5.71□□□□□ -1.5
PTPN4-206ENST00000441089 PHOSPHO2Q8TCD6 241 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 SLC9A7Q96T83 725 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 FSD1Q9BTV5 496 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 HIPK3Q9H422 1215 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 GINM1Q9NU53 330 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 STIM2Q9P246 746 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 HERC5Q9UII4 1024 aaKnown RBP5.71□□□□□ -1.5
PTPN4-206ENST00000441089 COL4A6Q14031 1691 aa5.71□□□□□ -1.5
PTPN4-206ENST00000441089 FRYQ5TBA9 3013 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 MYO10Q9HD67 2058 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 MCM3APO60318 1980 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 A0A0U1RQG5 324 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ARVCFO00192 962 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 LPXNO60711 386 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 PRNPP04156 253 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ACTN1P12814 892 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 AKR1A1P14550 325 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 NBL1P41271 181 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 NLRP12P59046 1061 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 PICALMQ13492 652 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 PUM1Q14671 1186 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPN4-206ENST00000441089 NAA30Q147X3 362 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 BMP2KLQ5H9B9 411 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 PRAMEF19Q5SWL8 479 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 MCTP2Q6DN12 878 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 FAM126BQ8IXS8 530 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ABRAQ8N0Z2 381 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 NEK9Q8TD19 979 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 PIK3R5Q8WYR1 880 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 NKD2Q969F2 451 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-206ENST00000441089 ECHDC1Q9NTX5 307 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 MUTYHQ9UIF7 546 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 TTC41PQ6P2S7 1318 aa5.7□□□□□ -1.5
PTPN4-206ENST00000441089 TRIP12Q14669 1992 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 H0Y858 1186 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 CNMDO75829 334 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 KIF4AO95239 1232 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 MAP4K4O95819 1239 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 CD4P01730 458 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 IFIT1P09914 478 aaKnown RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 FOSL1P15407 271 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 SDSP20132 328 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 MAP4P27816 1152 aaKnown RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 PRDX5P30044 214 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 ADMP35318 185 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 PHKA1P46020 1223 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 PUM3Q15397 648 aaKnown RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 ZNF124Q15973 351 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 KCNA10Q16322 511 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 ZNF648Q5T619 568 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-206ENST00000441089 SPOCD1Q6ZMY3 1216 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
PTPN4-206ENST00000441089 CACTIN-AS1Q8N1I8 211 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms