RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ZFYVE28Q9HCC9 887 aa21.13■□□□□ 0.97
SNX17-203ENST00000440760 GPRC5CQ9NQ84 441 aa21.13■□□□□ 0.97
SNX17-203ENST00000440760 ODF2LQ9ULJ1 636 aa21.13■□□□□ 0.97
SNX17-203ENST00000440760 SLC15A5A6NIM6 579 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 KCNJ18B7U540 433 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 AOC2O75106 756 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 GCNT3O95395 438 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 GAP43P17677 238 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 ATP4AP20648 1035 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 NMT1P30419 496 aaKnown RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 TCF7P36402 384 aaPredicted RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 KCNJ12Q14500 433 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 ANKEF1Q9NU02 776 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 PRPF6O94906 941 aaKnown RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 SNAI1O95863 264 aaPredicted RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 ZNF131P52739 623 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 KRT31Q15323 416 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 CELF3Q5SZQ8 465 aaKnown RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 TAPT1Q6NXT6 567 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 ZNF467Q7Z7K2 595 aaPredicted RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 TRIM50Q86XT4 487 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 SCFD2Q8WU76 684 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 HHIPL1Q96JK4 782 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 CEP170P1Q96L14 293 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 ZNF830Q96NB3 372 aaPredicted RBP21.12■□□□□ 0.97
SNX17-203ENST00000440760 FIZ1Q96SL8 496 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 KATNBL1Q9H079 304 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 TAB2Q9NYJ8 693 aa21.12■□□□□ 0.97
SNX17-203ENST00000440760 TTLL4Q14679 1199 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 ZCWPW2Q504Y3 356 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 TCP11X2Q5H9J9 407 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 KCNV1Q6PIU1 500 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 EPM2AIP1Q7L775 607 aaPredicted RBP21.11■□□□□ 0.97
SNX17-203ENST00000440760 TMC6Q7Z403 805 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 OLFML3Q9NRN5 406 aa21.11■□□□□ 0.97
SNX17-203ENST00000440760 MAFBQ9Y5Q3 323 aaPredicted RBP21.11■□□□□ 0.97
SNX17-203ENST00000440760 IGKV6D-21A0A0A0MT36 114 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 CBFA2T2O43439 604 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 HOXD13P35453 343 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 ADCYAP1R1P41586 468 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 TM4SF4P48230 202 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 SOX10P56693 466 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 KCNA1Q09470 495 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 ZC2HC1CQ53FD0 456 aaPredicted RBP21.1■□□□□ 0.97
SNX17-203ENST00000440760 ODR4Q5SWX8 454 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 MORN1Q5T089 497 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 FILIP1Q7Z7B0 1213 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 KSR1Q8IVT5 923 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
SNX17-203ENST00000440760 SPATA33Q96N06 139 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 GPR20Q99678 358 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 THAP9Q9H5L6 903 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 VTA1Q9NP79 307 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 MGAMO43451 1857 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.1■□□□□ 0.97
SNX17-203ENST00000440760 NOP56O00567 594 aaKnown RBP21.1■□□□□ 0.97
SNX17-203ENST00000440760 NKRFO15226 690 aaKnown RBP eCLIP21.1■□□□□ 0.97
SNX17-203ENST00000440760 DKC1O60832 514 aaKnown RBP eCLIP21.1■□□□□ 0.97
SNX17-203ENST00000440760 MTERF2Q49AM1 385 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 MAMDC4Q6UXC1 1216 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 CCDC186Q7Z3E2 898 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 TINF2Q9BSI4 451 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 IKZF4Q9H2S9 585 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 KCTD10Q9H3F6 313 aa21.1■□□□□ 0.97
SNX17-203ENST00000440760 A0A1B0GTH6 734 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 OATP04181 439 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 CTGFP29279 349 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 LRRC63Q05C16 580 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 MAP2K5Q13163 448 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 FAM102BQ5T8I3 360 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 OTUD6AQ7L8S5 288 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 FAM178BQ8IXR5 827 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 SEPT1Q8WYJ6 367 aa21.09■□□□□ 0.97
SNX17-203ENST00000440760 CNOT6LQ96LI5 555 aaKnown RBP21.09■□□□□ 0.97
SNX17-203ENST00000440760 LIMA1Q9UHB6 759 aaKnown RBP21.09■□□□□ 0.97
SNX17-203ENST00000440760 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
SNX17-203ENST00000440760 TEX33O43247 280 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 MARK3P27448 753 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 ARID5BQ14865 1188 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 XKR3Q5GH77 459 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 LRRC55Q6ZSA7 311 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 TSG101Q99816 390 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 VPS16Q9H269 839 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 CYP26B1Q9NR63 512 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 FLRT1Q9NZU1 646 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 ZHX1Q9UKY1 873 aaPredicted RBP21.08■□□□□ 0.97
SNX17-203ENST00000440760 ZMYM2Q9UBW7 1377 aa21.08■□□□□ 0.97
SNX17-203ENST00000440760 COPB1P53618 953 aaKnown RBP21.08■□□□□ 0.96
SNX17-203ENST00000440760 ARHGAP1Q07960 439 aa21.08■□□□□ 0.96
SNX17-203ENST00000440760 CCL14Q16627 93 aa21.08■□□□□ 0.96
SNX17-203ENST00000440760 SEL1LQ9UBV2 794 aa21.08■□□□□ 0.96
SNX17-203ENST00000440760 GOLGA6L6A8MZA4 724 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 K7ENM7 598 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 CA12O43570 354 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 STAT5BP51692 787 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 SPAG1Q07617 926 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 VSTM4Q8IW00 320 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 NOC3LQ8WTT2 800 aaKnown RBP21.07■□□□□ 0.96
SNX17-203ENST00000440760 CAPNS2Q96L46 248 aa21.07■□□□□ 0.96
SNX17-203ENST00000440760 XPNPEP1Q9NQW7 623 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms