RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CUTAO60888 179 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 EFCAB14O75071 495 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 EPHA5P54756 1037 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 BMS1Q14692 1282 aaKnown RBP4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 HS1BP3Q53T59 392 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 FIGNQ5HY92 759 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 PKN3Q6P5Z2 889 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 KBTBD2Q8IY47 623 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 ANKRD13AQ8IZ07 590 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 AFAP1Q8N556 730 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 WDR48Q8TAF3 677 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 IGDCC4Q8TDY8 1250 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 DVL3Q92997 716 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 FBXW5Q969U6 566 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 SEMA4AQ9H3S1 761 aa4.52□□□□□ -1.69
HMGB3P11-201ENST00000440127 ABCC1P33527 1531 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 ATP10AO60312 1499 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 PLA2R1Q13018 1463 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 CCDC163A0A0D9SF12 145 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 H0Y858 1186 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 WNT9AO14904 365 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 MSCO60682 206 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 EPHB4P54760 987 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 PPP2CBP62714 309 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 PPP2CAP67775 309 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 ADAM17P78536 824 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 NFATC3Q12968 1075 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 GPR19Q15760 415 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 CRY1Q16526 586 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 SKIDA1Q1XH10 827 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 CCDC184Q52MB2 194 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 HABP4Q5JVS0 413 aaKnown RBP4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 SLFN13Q68D06 897 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 KCNT2Q6UVM3 1135 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 FAM9BQ8IZU0 186 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZBTB38Q8NAP3 1195 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 MSL2Q9HCI7 577 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 CATSPERZQ9NTU4 200 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 ARHGAP28Q9P2N2 729 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZFP69BQ9UJL9 534 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 FBXO10Q9UK96 956 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 TCAF1Q9Y4C2 921 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 KDM5CP41229 1560 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 KANK1Q14678 1352 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 DHX29Q7Z478 1369 aaKnown RBP4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 SBNO2Q9Y2G9 1366 aa4.51□□□□□ -1.69
HMGB3P11-201ENST00000440127 IQGAP3Q86VI3 1631 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 MAGI2Q86UL8 1455 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 ASXL2Q76L83 1435 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 PRAG1Q86YV5 1406 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 SCAPERQ9BY12 1400 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 CCDC85CA6NKD9 419 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZNF839A8K0R7 811 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 C1QTNF3-AMACRE9PGA6 284 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 MLLT6P55198 1093 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 NFKB2Q00653 900 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 GUCY1A3Q02108 690 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 GRIN1Q05586 938 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 RALBP1Q15311 655 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 NTRK3Q16288 839 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 CD276Q5ZPR3 534 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 Q6ZUG5 572 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZCCHC14Q8WYQ9 949 aaKnown RBP4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 RBM15Q96T37 977 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 C1QTNF3Q9BXJ4 246 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 IPPKQ9H8X2 491 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 SEC61A2Q9H9S3 476 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 PPARGC1AQ9UBK2 798 aaKnown RBP4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 ADAM29Q9UKF5 820 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 SRPK3Q9UPE1 567 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 ATP23Q9Y6H3 246 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 GPRASP1Q5JY77 1395 aa4.5□□□□□ -1.69
HMGB3P11-201ENST00000440127 FANCAO15360 1455 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 KIF3BO15066 747 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 B4GALT3O60512 393 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 CKMP06732 381 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 COL6A2P12110 1019 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 USP10Q14694 798 aaKnown RBP4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 NFE2L2Q16236 605 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZMAT1Q5H9K5 638 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZC3H7AQ8IWR0 971 aaKnown RBP4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 CLEC4DQ8WXI8 215 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 MKL1Q969V6 931 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 GPATCH3Q96I76 525 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 C8orf49Q96NF6 230 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 DEPDC7Q96QD5 511 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 DHRS4Q9BTZ2 278 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 RIC8BQ9NVN3 520 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZDHHC9Q9Y397 364 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 MRPL42Q9Y6G3 142 aaKnown RBP4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 KTN1Q86UP2 1357 aaKnown RBP4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 BCORL1Q5H9F3 1711 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 ADGRL1O94910 1474 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 A2MP01023 1474 aa4.49□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZBED9Q6R2W3 1325 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 PTPRTO14522 1441 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 ABCA9Q8IUA7 1624 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 ARVCFO00192 962 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms