RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MEIS1O00470 390 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 RAD21O60216 631 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 ACSL3O95573 720 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 RARAP10276 462 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 NQO1P15559 274 aaKnown RBP14.54□□□□□ -0.08
ACTN1-204ENST00000438964 NUGGCQ68CJ6 796 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 FAM47EQ6ZV65 393 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 GLYCTKQ8IVS8 523 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 CLIC2O15247 247 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 KRT18P05783 430 aaKnown RBP14.54□□□□□ -0.08
ACTN1-204ENST00000438964 ABL2P42684 1182 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 KCNJ1P48048 391 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 MARCKSL1P49006 195 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 PMS2P54278 862 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 DR1Q01658 176 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 IRF2BP2Q7Z5L9 587 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 CPNE8Q86YQ8 564 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 ARMC2Q8NEN0 867 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 FAM84BQ96KN1 310 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-204ENST00000438964 CRNKL1Q9BZJ0 848 aaKnown RBP14.54□□□□□ -0.08
ACTN1-204ENST00000438964 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
ACTN1-204ENST00000438964 C1orf167Q5SNV9 1468 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 NR2F2P24468 414 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 STAT3P40763 770 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 MAP2K1Q02750 393 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 LRRC63Q05C16 580 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 CCDC152Q4G0S7 254 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 TXNRD3Q86VQ6 643 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 TBC1D22AQ8WUA7 517 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 RAD54LQ92698 747 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 EBF2Q9HAK2 575 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 ANKRD63C9JTQ0 380 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 UCHL3P15374 230 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 ERFP50548 548 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 CAVIN4Q5BKX8 364 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 EGFL6Q8IUX8 553 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 ACTRT1Q8TDG2 376 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 TGFBRAP1Q8WUH2 860 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 TLCD1Q96CP7 247 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 RMDN2Q96LZ7 410 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 GPR101Q96P66 508 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 TMEM237Q96Q45 408 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 PAIP2Q9BPZ3 127 aaKnown RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 DDX23Q9BUQ8 820 aaKnown RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 GANQ9H2C0 597 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 NOP53Q9NZM5 478 aaKnown RBP14.53□□□□□ -0.08
ACTN1-204ENST00000438964 KIAA1024Q9UPX6 916 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 SLIT2O94813 1529 aa14.53□□□□□ -0.08
ACTN1-204ENST00000438964 CASP4P49662 377 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 TUBP50607 506 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 KCNA1Q09470 495 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 KRT79Q5XKE5 535 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 PALB2Q86YC2 1186 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 REXO1Q8N1G1 1221 aaKnown RBP14.52□□□□□ -0.08
ACTN1-204ENST00000438964 NEK9Q8TD19 979 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 HOOK2Q96ED9 719 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 PWWP2AQ96N64 755 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 TAS2R14Q9NYV8 317 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 NKX1-2Q9UD57 310 aaPredicted RBP14.52□□□□□ -0.08
ACTN1-204ENST00000438964 POTEB3A0JP26 581 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 POTECB2RU33 542 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 PAEPP09466 180 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 GALCP54803 685 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 POTEBQ6S5H4 581 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 SLC30A10Q6XR72 485 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 CUEDC2Q9H467 287 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 PIDD1Q9HB75 910 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 DAAM1Q9Y4D1 1078 aa14.52□□□□□ -0.08
ACTN1-204ENST00000438964 SFI1A8K8P3 1242 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 GRIK5Q16478 980 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 ANKRD20A2Q5SQ80 823 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 ANKRD20A1Q5TYW2 823 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 ANKRD20A3Q5VUR7 823 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-204ENST00000438964 NT5DC3Q86UY8 548 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 TRIM59Q8IWR1 403 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 CELF1Q92879 486 aaKnown RBP14.52□□□□□ -0.09
ACTN1-204ENST00000438964 PBKQ96KB5 322 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 AK8Q96MA6 479 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 PCDHB13Q9Y5F0 798 aa14.52□□□□□ -0.09
ACTN1-204ENST00000438964 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 DDX3XO00571 662 aaKnown RBP eCLIP14.51□□□□□ -0.094e-18■■□□□ 14.2
ACTN1-204ENST00000438964 H2AFZP0C0S5 128 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 SESN3P58005 492 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 GRIK3Q13003 919 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 GRM4Q14833 912 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 TAF11Q15544 211 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 TRIP13Q15645 432 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-204ENST00000438964 H2AFVQ71UI9 128 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 ZNF34Q8IZ26 560 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 ZNF444Q8N0Y2 327 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-204ENST00000438964 FITM2Q8N6M3 262 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms