RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CASP8Q14790 479 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 SYTL5Q8TDW5 730 aaPredicted RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 IFIH1Q9BYX4 1025 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 NLRC4Q9NPP4 1024 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CWC15Q9P013 229 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 EML1O00423 815 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 EPHX2P34913 555 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 VAV2P52735 878 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 RPS6P62753 249 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 APBA1Q02410 837 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 KIF5AQ12840 1032 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 COG2Q14746 738 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 GPR162Q16538 588 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 REPS2Q8NFH8 660 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 CSADQ9Y600 493 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 SAR1BQ9Y6B6 198 aa15.26■□□□□ 0.03
PTCHD3-201ENST00000438700 AKR1B10O60218 316 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 ARP10275 920 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 RPA1P27694 616 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 CDK17Q00537 523 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 KCNMA1Q12791 1236 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 LEKR1Q6ZMV7 388 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 EHBP1Q8NDI1 1231 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 SLC5A5Q92911 643 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 GDAP1L1Q96MZ0 367 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 RNF146Q9NTX7 359 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 PNMA2Q9UL42 364 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 MYH10P35580 1976 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 CHMP2AO43633 222 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 PSMD10O75832 226 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 HNRNPH3P31942 346 aaKnown RBP15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 NOP2P46087 812 aaKnown RBP15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 SETQ01105 290 aaPredicted RBP15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 SNRNP48Q6IEG0 339 aaKnown RBP15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 NSMFQ6X4W1 530 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 USP50Q70EL3 339 aaPredicted RBP15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 BAP1Q92560 729 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 DRC1Q96MC2 740 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 ZNF577Q9BSK1 485 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 ADAMTS5Q9UNA0 930 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 RABGAP1Q9Y3P9 1069 aa15.25■□□□□ 0.03
PTCHD3-201ENST00000438700 ZNF185O15231 689 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 GAS7O60861 476 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 ITGB5P18084 799 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 SECISBP2LQ93073 1101 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 IQCDQ96DY2 449 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 TAAR1Q96RJ0 339 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 EIF2AK1Q9BQI3 630 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 REEP2Q9BRK0 252 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 MXRA8Q9BRK3 442 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 KCTD10Q9H3F6 313 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 MLXIPQ9HAP2 919 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 JADE2Q9NQC1 790 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 ZNF214Q9UL59 606 aaPredicted RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 DNM3Q9UQ16 869 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 PCDHA13Q9Y5I0 950 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 CAPN6Q9Y6Q1 641 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 TMEM132BQ14DG7 1078 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 TDRD12Q587J7 1177 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 SH3D19Q5HYK7 790 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 ZNF662Q6ZS27 426 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 MOB2Q70IA6 237 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 SFR1Q86XK3 245 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 RIN2Q8WYP3 895 aaPredicted RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 MAP3K20Q9NYL2 800 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
PTCHD3-201ENST00000438700 RSPH10B2B2RC85 870 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 RSPH10BP0C881 870 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 GFPT1Q06210 699 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PPP2R5CQ13362 524 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 ADAM9Q13443 819 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 GIT2Q14161 759 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 PURBQ96QR8 312 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 LSM14BQ9BX40 385 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 BHMT2Q9H2M3 363 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 IPO5O00410 1097 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-201ENST00000438700 OAZ1P54368 228 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms