RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 FAM20AQ96MK3 541 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
TTC3-209ENST00000438055 GANQ9H2C0 597 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 NAGPAQ9UK23 515 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 PCDHA2Q9Y5H9 948 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 PDXKO00764 312 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 EXOC3O60645 756 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 SPATA31C1P0DKV0 1188 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 GLE1Q53GS7 698 aaKnown RBP18.27■□□□□ 0.52
TTC3-209ENST00000438055 ALS2CLQ60I27 953 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 LMBR1Q8WVP7 490 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 DPH5Q9H2P9 285 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 AIPL1Q9NZN9 384 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 BZW2Q9Y6E2 419 aaKnown RBP18.27■□□□□ 0.52
TTC3-209ENST00000438055 TMEM110-MUSTN1A8MSY1 372 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 ECE2O60344 883 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 ITIH3Q06033 890 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 HYIQ5T013 277 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 MEI1Q5TIA1 1274 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 GLYCTKQ8IVS8 523 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 BBXQ8WY36 941 aaPredicted RBP18.27■□□□□ 0.52
TTC3-209ENST00000438055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■□□□□ 8.5
TTC3-209ENST00000438055 FAM198AQ9UFP1 575 aa18.27■□□□□ 0.52
TTC3-209ENST00000438055 KIF4AO95239 1232 aa18.27■□□□□ 0.51
TTC3-209ENST00000438055 ETNPPLQ8TBG4 499 aa18.27■□□□□ 0.51
TTC3-209ENST00000438055 CASKIN2Q8WXE0 1202 aa18.27■□□□□ 0.51
TTC3-209ENST00000438055 TCEAL9Q9UHQ7 104 aa18.27■□□□□ 0.51
TTC3-209ENST00000438055 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 ECE1P42892 770 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
TTC3-209ENST00000438055 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 MAST2Q6P0Q8 1798 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 MYH1P12882 1939 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 ZDHHC15Q96MV8 337 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
TTC3-209ENST00000438055 PSMC2P35998 433 aaKnown RBP18.25■□□□□ 0.51
TTC3-209ENST00000438055 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
TTC3-209ENST00000438055 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 PARVGQ9HBI0 331 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 TRPC5Q9UL62 973 aaPredicted RBP18.25■□□□□ 0.51
TTC3-209ENST00000438055 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
TTC3-209ENST00000438055 PGRMC1O00264 195 aaKnown RBP18.25■□□□□ 0.51
TTC3-209ENST00000438055 STAT2P52630 851 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 COG2Q14746 738 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 AOC3Q16853 763 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 PCIF1Q9H4Z3 704 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 ARHGEF35A5YM69 484 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 TULP2O00295 520 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 TNFAIP3P21580 790 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 SH2D3AQ9BRG2 576 aa18.25■□□□□ 0.51
TTC3-209ENST00000438055 GCOM1H8Y6P7 765 aaPredicted RBP18.24■□□□□ 0.51
TTC3-209ENST00000438055 RBAK-RBAKDNI3L0D1 243 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 EYA4O95677 639 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 POLR2MP0CAP2 368 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 SREBF1P36956 1147 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 SLC27A3Q5K4L6 730 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 STXBP4Q6ZWJ1 553 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 SH3BP5LQ7L8J4 393 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 AMACRQ9UHK6 382 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 DNAJC12Q9UKB3 198 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 H0YHG0 523 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 LIG3P49916 1009 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 OR2W6PQ8NHA6 318 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
TTC3-209ENST00000438055 SLC35C1Q96A29 364 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 TRAF3IP3Q9Y228 551 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
TTC3-209ENST00000438055 KIAA0754O94854 1291 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 CTNNA1P35221 906 aaKnown RBP18.24■□□□□ 0.51
TTC3-209ENST00000438055 IFFO1Q0D2I5 559 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 TTMPQ5BVD1 217 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
TTC3-209ENST00000438055 NOC2LQ9Y3T9 749 aaKnown RBP18.24■□□□□ 0.51
TTC3-209ENST00000438055 TBX3O15119 743 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 SART1O43290 800 aaKnown RBP18.23■□□□□ 0.51
TTC3-209ENST00000438055 EVI5O60447 810 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 DRAP1Q14919 205 aaPredicted RBP18.23■□□□□ 0.51
TTC3-209ENST00000438055 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 ACER1Q8TDN7 264 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 ZNF577Q9BSK1 485 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 BTAF1O14981 1849 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 CYP3A7-CYP3A51PA0A087WV96 503 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 H0YIN7 160 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 KRT13P13646 458 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 FERP16591 822 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 CYP3A7P24462 503 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 GUCY1A3Q02108 690 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 METTL13Q8N6R0 699 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms