RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	CDHR5	Q9HBB8	845 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	UST	Q9Y2C2	406 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	PCDHA2	Q9Y5H9	948 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	ASPM	Q8IZT6	3477 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	ATRX	P46100	2492 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	FRY	Q5TBA9	3013 aa		11.44	□□□□□ -0.58
RPP21-223	ENST00000436442	C2orf71	A6NGG8	1288 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	RRN3P2	A6NIE6	340 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442		B4E1Z4	1266 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	WEE2	P0C1S8	567 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	MARK3	P27448	753 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	PDE4A	P27815	886 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	MTHFR	P42898	656 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	TPRN	Q4KMQ1	711 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	KIAA1841	Q6NSI8	718 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	KANK3	Q6NY19	840 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	XRRA1	Q6P2D8	792 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	SLC24A5	Q71RS6	500 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	THNSL1	Q8IYQ7	743 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	MRPL43	Q8N983	215 aa	Known RBP	11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	FLCN	Q8NFG4	579 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	TMEM40	Q8WWA1	233 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	SEPT1	Q8WYJ6	367 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	CASP10	Q92851	521 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	RTP3	Q9BQQ7	232 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	MFSD1	Q9H3U5	465 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	NOC2L	Q9Y3T9	749 aa	Known RBP	11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	PCDHB7	Q9Y5E2	793 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	DOCK8	Q8NF50	2099 aa		11.43	□□□□□ -0.58
RPP21-223	ENST00000436442	SMIM35	A0A1B0GVV1	85 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	MEIS2	O14770	477 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	CLASP2	O75122	1294 aa	Known RBP	11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	EOMES	O95936	686 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	FGFR1	P11362	822 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	ITGB5	P18084	799 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	LAG3	P18627	525 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	DSC3	Q14574	896 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	CES5A	Q6NT32	575 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	PLCD3	Q8N3E9	789 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	TRAPPC12	Q8WVT3	735 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	CASD1	Q96PB1	797 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	ADAM2	Q99965	735 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	SMARCAD1	Q9H4L7	1026 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	LRFN2	Q9ULH4	789 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	PCDHB15	Q9Y5E8	787 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442		R4GN57	208 aa		11.42	□□□□□ -0.58
RPP21-223	ENST00000436442	PNMA6F	A0A0J9YX94	578 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	PIK3CD	O00329	1044 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	ZNF213	O14771	459 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	IGBP1	P78318	339 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	PLCB4	Q15147	1175 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	SPOUT1	Q5T280	376 aa	Known RBP	11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	KCNT2	Q6UVM3	1135 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	NME8	Q8N427	588 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	DCLK2	Q8N568	766 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	C12orf76	Q8N812	135 aa	Predicted RBP	11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	TDRD5	Q8NAT2	981 aa	Known RBP	11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	SUMF1	Q8NBK3	374 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	GPRASP2	Q96D09	838 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	ELAC1	Q9H777	363 aa	Known RBP	11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	ENTPD7	Q9NQZ7	604 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	CYP26B1	Q9NR63	512 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	C1orf112	Q9NSG2	853 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	TMEM161A	Q9NX61	479 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	DLGAP2	Q9P1A6	1054 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	DUSP12	Q9UNI6	340 aa		11.41	□□□□□ -0.58
RPP21-223	ENST00000436442	KRBA1	A5PL33	1030 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	PBX3	P40426	434 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	PDE1A	P54750	535 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	KRT76	Q01546	638 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	TRAF1	Q13077	416 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	TDG	Q13569	410 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	GRM4	Q14833	912 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	USP17L6P	Q6QN14	398 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	TMC7	Q7Z402	723 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	HOMER1	Q86YM7	354 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	KIAA0319L	Q8IZA0	1049 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	SLC39A11	Q8N1S5	342 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	CYP2W1	Q8TAV3	490 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	SLC22A17	Q8WUG5	538 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	GLG1	Q92896	1179 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	TMEM117	Q9H0C3	514 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	PUF60	Q9UHX1	559 aa	Known RBP	11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	ST3GAL5	Q9UNP4	418 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	UBIAD1	Q9Y5Z9	338 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	SPEG	Q15772	3267 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	WDR81	Q562E7	1941 aa		11.4	□□□□□ -0.58
RPP21-223	ENST00000436442	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.4	□□□□□ -0.59
RPP21-223	ENST00000436442	CEP295	Q9C0D2	2601 aa		11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	EPCAM	P16422	314 aa		11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	NFX1	Q12986	1120 aa	Known RBP	11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	SMC1A	Q14683	1233 aa	Known RBP	11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	RARS2	Q5T160	578 aa	Known RBP	11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	IFIT1B	Q5T764	474 aa	Known RBP	11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	MTHFD1L	Q6UB35	978 aa		11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	CYB5R4	Q7L1T6	521 aa		11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	NLRX1	Q86UT6	975 aa		11.39	□□□□□ -0.59
RPP21-223	ENST00000436442	SIX5	Q8N196	739 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms