RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TSHZ1Q6ZSZ6 1077 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 KIAA0319LQ8IZA0 1049 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 NME8Q8N427 588 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 TOP1MTQ969P6 601 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 FAM167AQ96KS9 214 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 KIF2CQ99661 725 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 BRMS1Q9HCU9 246 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 NRBP2Q9NSY0 501 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 INSL6Q9Y581 213 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 MYO9BQ13459 2157 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 C22orf31O95567 290 aa20.64■□□□□ 0.89
HMGN1-207ENST00000436324 OATP04181 439 aa20.64■□□□□ 0.89
HMGN1-207ENST00000436324 YME1L1Q96TA2 773 aa20.64■□□□□ 0.89
HMGN1-207ENST00000436324 CDHR5Q9HBB8 845 aa20.64■□□□□ 0.89
HMGN1-207ENST00000436324 LINC01553A4QN01 128 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 ENPP3O14638 875 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 MARCH6O60337 910 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 TRIM29Q14134 588 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 TMEM266Q2M3C6 531 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 KRT40Q6A162 431 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 PRDM6Q9NQX0 595 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 PADI3Q9ULW8 664 aa20.63■□□□□ 0.89
HMGN1-207ENST00000436324 MICAL3Q7RTP6 2002 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 BTBD18B2RXH4 712 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 MMP1P03956 469 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 VTNP04004 478 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 GCFC2P16383 781 aaKnown RBP20.62■□□□□ 0.89
HMGN1-207ENST00000436324 IBSPP21815 317 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-207ENST00000436324 CLCN3P51790 818 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 HTRA4P83105 476 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-207ENST00000436324 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 PAK2Q13177 524 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 PPP4R3AQ6IN85 833 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 BANK1Q8NDB2 785 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 RDM1Q8NG50 284 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 TGS1Q96RS0 853 aaKnown RBP20.62■□□□□ 0.89
HMGN1-207ENST00000436324 CEP131Q9UPN4 1083 aa20.62■□□□□ 0.89
HMGN1-207ENST00000436324 EML1O00423 815 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 GTPBP6O43824 516 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-207ENST00000436324 NFX1Q12986 1120 aaKnown RBP20.61■□□□□ 0.89
HMGN1-207ENST00000436324 GRB10Q13322 594 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 KIZQ2M2Z5 673 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 EFCAB12Q6NXP0 572 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 DIS3L2Q8IYB7 885 aaKnown RBP20.61■□□□□ 0.89
HMGN1-207ENST00000436324 LRRC71Q8N4P6 559 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 GDPD5Q8WTR4 605 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 TNFRSF25Q93038 417 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 NAP1L4Q99733 375 aaKnown RBP20.61■□□□□ 0.89
HMGN1-207ENST00000436324 C17orf80Q9BSJ5 609 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 SUGCTQ9HAC7 445 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 KCNMB3Q9NPA1 279 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 SEPT9Q9UHD8 586 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-207ENST00000436324 AKT3Q9Y243 479 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 SQORQ9Y6N5 450 aa20.61■□□□□ 0.89
HMGN1-207ENST00000436324 SIP14410 1827 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 KDM3AQ9Y4C1 1321 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 TMEM150BA6NC51 233 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 MAGEB2O15479 319 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 ERVK-21P61565 698 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 RTN4RL1Q86UN2 441 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-207ENST00000436324 LINC01599Q8WXQ3 324 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 HAS1Q92839 578 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 ZNF668Q96K58 619 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-207ENST00000436324 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-207ENST00000436324 FAM20AQ96MK3 541 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 OSMRQ99650 979 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 SH2D3AQ9BRG2 576 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 NOC2LQ9Y3T9 749 aaKnown RBP20.6■□□□□ 0.89
HMGN1-207ENST00000436324 MTCH2Q9Y6C9 303 aa20.6■□□□□ 0.89
HMGN1-207ENST00000436324 COL6A3P12111 3177 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 DDX11L8A8MPP1 907 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 RPS6KA5O75582 802 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 MTERF2Q49AM1 385 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 TMEM40Q8WWA1 233 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 VAV3Q9UKW4 847 aa20.59■□□□□ 0.89
HMGN1-207ENST00000436324 MYH9P35579 1960 aaKnown RBP20.58■□□□□ 0.89
HMGN1-207ENST00000436324 DLL1O00548 723 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 LPXNO60711 386 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 TMOD1P28289 359 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 RBM25P49756 843 aaKnown RBP20.58■□□□□ 0.89
HMGN1-207ENST00000436324 NLRP11P59045 1033 aaKnown RBP20.58■□□□□ 0.89
HMGN1-207ENST00000436324 TBC1D8BQ0IIM8 1120 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 PPP2R5CQ13362 524 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.89
HMGN1-207ENST00000436324 XKR3Q5GH77 459 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.89
HMGN1-207ENST00000436324 MAP7D2Q96T17 732 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 FTHL17Q9BXU8 183 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 TMX1Q9H3N1 280 aa20.58■□□□□ 0.89
HMGN1-207ENST00000436324 GPR32O75388 356 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 STBD1O95210 358 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 BAG4O95429 457 aaKnown RBP20.57■□□□□ 0.88
HMGN1-207ENST00000436324 CRYBB1P53674 252 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-207ENST00000436324 PSMC5P62195 406 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
HMGN1-207ENST00000436324 NCAPH2Q6IBW4 605 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 FBXO22Q8NEZ5 403 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 C8orf76Q96K31 380 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms