RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 PABPC5Q96DU9 382 aaKnown RBP25.34■■□□□ 1.65
HMG20B-205ENST00000435022 FTHL17Q9BXU8 183 aa25.34■■□□□ 1.65
HMG20B-205ENST00000435022 RNF26Q9BY78 433 aaPredicted RBP25.34■■□□□ 1.65
HMG20B-205ENST00000435022 NOC2LQ9Y3T9 749 aaKnown RBP25.34■■□□□ 1.65
HMG20B-205ENST00000435022 MAFBQ9Y5Q3 323 aaPredicted RBP25.34■■□□□ 1.65
HMG20B-205ENST00000435022 MYH9P35579 1960 aaKnown RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 M0QZ92 97 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 DNAJB1P25685 340 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 CCT2P78371 535 aaKnown RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 PRR16Q569H4 304 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 PTCRAQ6ISU1 281 aaPredicted RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 ZNF746Q6NUN9 644 aaPredicted RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 MIS18BP1Q6P0N0 1132 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 NME8Q8N427 588 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 TNPO1Q92973 898 aaKnown RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 C11orf84Q9BUA3 381 aaPredicted RBP25.33■■□□□ 1.65
HMG20B-205ENST00000435022 SLC26A6Q9BXS9 759 aa25.33■■□□□ 1.65
HMG20B-205ENST00000435022 FNDC1Q4ZHG4 1894 aaPredicted RBP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 GRXCR2A6NFK2 248 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 GTF2F1P35269 517 aaKnown RBP eCLIP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 SETQ01105 290 aaPredicted RBP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 HYAL1Q12794 435 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 PAN2Q504Q3 1202 aaKnown RBP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 ZNF484Q5JVG2 852 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 CMTR2Q8IYT2 770 aaKnown RBP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 PPP1R16BQ96T49 567 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 ALG13Q9NP73 1137 aaKnown RBP25.32■■□□□ 1.64
HMG20B-205ENST00000435022 TBC1D22BQ9NU19 505 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 RWDD3Q9Y3V2 267 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 PLXNA4Q9HCM2 1894 aa25.32■■□□□ 1.64
HMG20B-205ENST00000435022 CSPG5O95196 566 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 MMP1P03956 469 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 CTC1Q2NKJ3 1217 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 CCDC12Q8WUD4 166 aaPredicted RBP25.31■■□□□ 1.64
HMG20B-205ENST00000435022 C1QTNF1Q9BXJ1 281 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 LMAN2LQ9H0V9 348 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 PLAGL2Q9UPG8 496 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 GINS2Q9Y248 185 aa25.31■■□□□ 1.64
HMG20B-205ENST00000435022 ZNF862O60290 1169 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 ITGB1P05556 798 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 GNA11P29992 359 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 DLX2Q07687 328 aaPredicted RBP25.3■■□□□ 1.64
HMG20B-205ENST00000435022 MCTP2Q6DN12 878 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 TRMT1LQ7Z2T5 733 aaKnown RBP25.3■■□□□ 1.64
HMG20B-205ENST00000435022 LINC01465Q8N7H1 131 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 BBXQ8WY36 941 aaPredicted RBP25.3■■□□□ 1.64
HMG20B-205ENST00000435022 GJA10Q969M2 543 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 LARP6Q9BRS8 491 aaKnown RBP25.3■■□□□ 1.64
HMG20B-205ENST00000435022 HCSTQ9UBK5 93 aa25.3■■□□□ 1.64
HMG20B-205ENST00000435022 MSH4O15457 936 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 GPR32O75388 356 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 REC8O95072 547 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 VTNP04004 478 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 NFX1Q12986 1120 aaKnown RBP25.29■■□□□ 1.64
HMG20B-205ENST00000435022 NPY5RQ15761 445 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 UGCGQ16739 394 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 KIZQ2M2Z5 673 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 ERICH6BQ5W0A0 696 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 FAM228AQ86W67 206 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 SMAP1Q8IYB5 467 aaPredicted RBP25.29■■□□□ 1.64
HMG20B-205ENST00000435022 LRFN3Q9BTN0 628 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 PLVAPQ9BX97 442 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 ZSWIM6Q9HCJ5 1215 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 CLDND1Q9NY35 253 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 GABBR1Q9UBS5 961 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 PCDHA10Q9Y5I2 948 aa25.29■■□□□ 1.64
HMG20B-205ENST00000435022 LINC01565O15544 149 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 PSMA5P28066 241 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 SARSP49591 514 aaKnown RBP25.28■■□□□ 1.64
HMG20B-205ENST00000435022 CLCN3P51790 818 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 RUFY3Q7L099 469 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 CCDC148Q8NFR7 591 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 SPPL3Q8TCT6 385 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 P2RX5Q93086 422 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 OSMRQ99650 979 aa25.28■■□□□ 1.64
HMG20B-205ENST00000435022 C9IYK1 514 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 TBX10O75333 385 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 RPS6KA5O75582 802 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 PSAPP07602 524 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 IRS1P35568 1242 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 EP400NLQ6ZTU2 488 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 ADGRD2Q7Z7M1 963 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 CKAP2LQ8IYA6 745 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 GJD3Q8N144 294 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 KLHL23Q8NBE8 558 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 AIFM3Q96NN9 605 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 ADAM2Q99965 735 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 RGS18Q9NS28 235 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 PPP4R2Q9NY27 417 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 ST3GAL5Q9UNP4 418 aa25.27■■□□□ 1.64
HMG20B-205ENST00000435022 FAM86C2PA6NEL3 165 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 PI4K2BG5E9Z4 385 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 M0R2N6 131 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 STAG3L1P0CL83 205 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 IBSPP21815 317 aaPredicted RBP25.26■■□□□ 1.63
HMG20B-205ENST00000435022 AKAP17AQ02040 695 aaKnown RBP25.26■■□□□ 1.63
HMG20B-205ENST00000435022 DSC3Q14574 896 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 BICD2Q8TD16 824 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 SLC5A5Q92911 643 aa25.26■■□□□ 1.63
HMG20B-205ENST00000435022 SH3GLB2Q9NR46 395 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms