RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 RNF10Q8N5U6 811 aaKnown RBP11.39□□□□□ -0.59
SCAF4-203ENST00000434667 SLC17A8Q8NDX2 589 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 CEP95Q96GE4 821 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 TSG101Q99816 390 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 TAS2R14Q9NYV8 317 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCAF4-203ENST00000434667 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 ATP6V1G2O95670 118 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
SCAF4-203ENST00000434667 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 FKBP3Q00688 224 aaKnown RBP11.39□□□□□ -0.59
SCAF4-203ENST00000434667 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 GLYCTKQ8IVS8 523 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 SCFD2Q8WU76 684 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 SCFD1Q8WVM8 642 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 DNAJC19Q96DA6 116 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 FAXDC2Q96IV6 333 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
SCAF4-203ENST00000434667 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 EME2A4GXA9 379 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 NR2F2P24468 414 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 CCNHP51946 323 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 SLC29A2Q14542 456 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 IRF2BP2Q7Z5L9 587 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 CD302Q8IX05 232 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 MREGQ8N565 214 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 FBXO25Q8TCJ0 367 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 XPO6Q96QU8 1125 aaKnown RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 PSMD1Q99460 953 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 ZMYND12Q9H0C1 365 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L15C9J2P7 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L13C9JLJ4 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L11C9JVI0 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L18D6R9N7 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L22D6RA61 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L17D6RBQ6 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L19D6RCP7 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L20D6RJB6 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 PGRMC1O00264 195 aaKnown RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 TRIM37O94972 964 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 RASA1P20936 1047 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 KCNJ1P48048 391 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 MMP14P50281 582 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 CYP4A11Q02928 519 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L24Q0WX57 530 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 TBC1D10BQ4KMP7 808 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 KRT79Q5XKE5 535 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 GPBP1Q86WP2 473 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 RDH13Q8NBN7 331 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 TPCN2Q8NHX9 752 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 C18orf8Q96DM3 657 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 MYH4Q9Y623 1939 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 CCDC189A1A4V9 331 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 ENO4A6NNW6 628 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 KCNQ2O43526 872 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 MYBP10242 640 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 RFC4P35249 363 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.598e-11■■■■■ 41.8
SCAF4-203ENST00000434667 ANKRD42Q8N9B4 389 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 GDAP1Q8TB36 358 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 PWWP2AQ96N64 755 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 GANQ9H2C0 597 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 SEC63Q9UGP8 760 aaKnown RBP11.38□□□□□ -0.59
SCAF4-203ENST00000434667 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
SCAF4-203ENST00000434667 UCHL3P15374 230 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 USP11P51784 963 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 PICALMQ13492 652 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 SHROOM1Q2M3G4 852 aaPredicted RBP11.37□□□□□ -0.59
SCAF4-203ENST00000434667 YTHDF3Q7Z739 585 aaKnown RBP11.37□□□□□ -0.59
SCAF4-203ENST00000434667 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 AGAP11Q8TF27 550 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 CHMP6Q96FZ7 201 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 EYA3Q99504 573 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 ANKRD63C9JTQ0 380 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 DIAPH2O60879 1101 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
SCAF4-203ENST00000434667 LRCH2Q5VUJ6 765 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 ZNF746Q6NUN9 644 aaPredicted RBP11.37□□□□□ -0.59
SCAF4-203ENST00000434667 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 ARHGEF26Q96DR7 871 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
SCAF4-203ENST00000434667 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.592e-15■■□□□ 11.9
SCAF4-203ENST00000434667 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms