RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 F13A1P00488 732 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 RPLP2P05387 115 aaKnown RBP17.36■□□□□ 0.37
TREX1-201ENST00000433541 IQCF3P0C7M6 154 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 RSPH10BP0C881 870 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 ACRP10323 421 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
TREX1-201ENST00000433541 ADAM17P78536 824 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 TMEM62Q0P6H9 643 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 C4orf19Q8IY42 314 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 CEP170P1Q96L14 293 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 SCLT1Q96NL6 688 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 TUFT1Q9NNX1 390 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 COLQQ9Y215 455 aaPredicted RBP17.36■□□□□ 0.37
TREX1-201ENST00000433541 AKT3Q9Y243 479 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 GINS2Q9Y248 185 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 PCDHA2Q9Y5H9 948 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 CLIC4Q9Y696 253 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 CAND2O75155 1236 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 RFC2P35250 354 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 DNM2P50570 870 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
TREX1-201ENST00000433541 PKP1Q13835 747 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 PDIA5Q14554 519 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 TRIM71Q2Q1W2 868 aaKnown RBP17.35■□□□□ 0.37
TREX1-201ENST00000433541 IER5Q5VY09 327 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 ARL6IP4Q66PJ3 421 aaKnown RBP17.35■□□□□ 0.37
TREX1-201ENST00000433541 EFCAB12Q6NXP0 572 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 LRRC71Q8N4P6 559 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 IL23AQ9NPF7 189 aa17.35■□□□□ 0.37
TREX1-201ENST00000433541 BMP2KQ9NSY1 1161 aaPredicted RBP17.35■□□□□ 0.37
TREX1-201ENST00000433541 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
TREX1-201ENST00000433541 SMIM35A0A1B0GVV1 85 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 ZBBXA8MT70 800 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 SLITRK3O94933 977 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 PARNO95453 639 aaKnown RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 C22orf31O95567 290 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 SIP14410 1827 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 CLCN3P51790 818 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 NPEPPSP55786 919 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 STK38Q15208 465 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 POTEGQ6S5H5 508 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 ANO5Q75V66 913 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 PIGOQ8TEQ8 1089 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 SLC7A3Q8WY07 619 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 RNPC3Q96LT9 517 aaKnown RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 JPH2Q9BR39 696 aaPredicted RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 NIFKQ9BYG3 293 aaKnown RBP17.34■□□□□ 0.37
TREX1-201ENST00000433541 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
TREX1-201ENST00000433541 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
TREX1-201ENST00000433541 PP2D1A8MPX8 630 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 ZBTB42B2RXF5 422 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 MED24O75448 989 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 FGBP02675 491 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 PFKMP08237 780 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 ACTN1P12814 892 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 RPA1P27694 616 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
TREX1-201ENST00000433541 CDC25AP30304 524 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 MRPS6P82932 125 aaKnown RBP17.33■□□□□ 0.36
TREX1-201ENST00000433541 RBL2Q08999 1139 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 CATSPER3Q86XQ3 398 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 TDHQ8IZJ6 230 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 USP28Q96RU2 1077 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 HSD17B14Q9BPX1 270 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 POLR3CQ9BUI4 534 aaPredicted RBP17.33■□□□□ 0.36
TREX1-201ENST00000433541 MTIF3Q9H2K0 278 aaKnown RBP17.33■□□□□ 0.36
TREX1-201ENST00000433541 TFIP11Q9UBB9 837 aaKnown RBP17.33■□□□□ 0.36
TREX1-201ENST00000433541 CDY2AQ9Y6F7 541 aa17.33■□□□□ 0.36
TREX1-201ENST00000433541 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 A0A087WWV3 80 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 ZBTB39O15060 712 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 VTNP04004 478 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 BMP8BP34820 402 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 EPHB4P54760 987 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 ZNF365Q70YC5 407 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 OTOP2Q7RTS6 562 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 EXOC8Q8IYI6 725 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 NME8Q8N427 588 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.32■□□□□ 0.36
TREX1-201ENST00000433541 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
TREX1-201ENST00000433541 TRPV2Q9Y5S1 764 aa17.32■□□□□ 0.36
TREX1-201ENST00000433541 TCHHQ07283 1943 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
TREX1-201ENST00000433541 SPATA31C1P0DKV0 1188 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 GHRP10912 638 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 RFC5P40937 340 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 UBA7P41226 1012 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 SHHQ15465 462 aa17.31■□□□□ 0.36
TREX1-201ENST00000433541 IL17AQ16552 155 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms