RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 NPAS4Q8IUM7 802 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 KIAA0319LQ8IZA0 1049 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 CRIPAKQ8N1N5 446 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 NME8Q8N427 588 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 BICD2Q8TD16 824 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 TMEM40Q8WWA1 233 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 CLP1Q92989 425 aaKnown RBP24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 LARP6Q9BRS8 491 aaKnown RBP24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 CDHR5Q9HBB8 845 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 TCEAL9Q9UHQ7 104 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 RWDD3Q9Y3V2 267 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 MRPL42Q9Y6G3 142 aaKnown RBP24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 MYO7AQ13402 2215 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 WDR81Q562E7 1941 aa24.73■■□□□ 1.55
RPUSD3-206ENST00000433535 H3BQ06 376 aaPredicted RBP24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 C22orf31O95567 290 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 CIITAP33076 1130 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 GATMP50440 423 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 NFX1Q12986 1120 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 PAN2Q504Q3 1202 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 EP400NLQ6ZTU2 488 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 SMAP1Q8IYB5 467 aaPredicted RBP24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 ZSWIM6Q9HCJ5 1215 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 GABBR1Q9UBS5 961 aa24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 MAFBQ9Y5Q3 323 aaPredicted RBP24.72■■□□□ 1.55
RPUSD3-206ENST00000433535 EDIL3O43854 480 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 RB1P06400 928 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 PSAPP07602 524 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 IL9P15248 144 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 CMTR2Q8IYT2 770 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 BBXQ8WY36 941 aaPredicted RBP24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 UPF3BQ9BZI7 483 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 ERVK-5Q9HDB9 667 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 RAPGEFL1Q9UHV5 662 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 NOC2LQ9Y3T9 749 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 SAMM50Q9Y512 469 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 PCDHA10Q9Y5I2 948 aa24.71■■□□□ 1.55
RPUSD3-206ENST00000433535 MGEA5O60502 916 aa24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 KIZQ2M2Z5 673 aa24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 PTCRAQ6ISU1 281 aaPredicted RBP24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 KHSRPQ92945 711 aaKnown RBP eCLIP24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 EPHX3Q9H6B9 360 aa24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 CD320Q9NPF0 282 aa24.7■■□□□ 1.54
RPUSD3-206ENST00000433535 RPS6KA5O75582 802 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 STAG3L1P0CL83 205 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 NLRP5P59047 1200 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 METTL13Q8N6R0 699 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 NEK9Q8TD19 979 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 GJA10Q969M2 543 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 PABPC5Q96DU9 382 aaKnown RBP24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 OSMRQ99650 979 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 LMAN2LQ9H0V9 348 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 ALG13Q9NP73 1137 aaKnown RBP24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 SH3GLB2Q9NR46 395 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 CYP46A1Q9Y6A2 500 aa24.69■■□□□ 1.54
RPUSD3-206ENST00000433535 WDR64B1ANS9 1081 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 MSH4O15457 936 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 CHMP2AO43633 222 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 VTNP04004 478 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 STK3Q13188 491 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 TRIM22Q8IYM9 498 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 PLVAPQ9BX97 442 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 PPP4R2Q9NY27 417 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 CLDND1Q9NY35 253 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 LRFN2Q9ULH4 789 aa24.68■■□□□ 1.54
RPUSD3-206ENST00000433535 EPB41L2O43491 1005 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 MMP1P03956 469 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 SARSP49591 514 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 CLCN3P51790 818 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 SSRP1Q08945 709 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 COL19A1Q14993 1142 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 TBCKQ8TEA7 893 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 ADAM2Q99965 735 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 C1QTNF1Q9BXJ1 281 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 ST3GAL5Q9UNP4 418 aa24.67■■□□□ 1.54
RPUSD3-206ENST00000433535 DENND3A2RUS2 1198 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 GRXCR2A6NFK2 248 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 CPLX1O14810 134 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 ZNF862O60290 1169 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 GAS7O60861 476 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 PRKCEQ02156 737 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 UGCGQ16739 394 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 FAM228AQ86W67 206 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 FAM178BQ8IXR5 827 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 AIFM3Q96NN9 605 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 DISC1Q9NRI5 854 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 PCDHA4Q9UN74 947 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 PLAGL2Q9UPG8 496 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 CEP131Q9UPN4 1083 aa24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 FNDC1Q4ZHG4 1894 aaPredicted RBP24.66■■□□□ 1.54
RPUSD3-206ENST00000433535 GPR32O75388 356 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 OATP04181 439 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 ITGB1P05556 798 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 GTF2F1P35269 517 aaKnown RBP eCLIP24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 USP11P51784 963 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 CRYBB1P53674 252 aaPredicted RBP24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 HYAL1Q12794 435 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 CAMK1Q14012 370 aa24.65■■□□□ 1.54
RPUSD3-206ENST00000433535 LRCH2Q5VUJ6 765 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms