RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 CRYGNQ8WXF5 182 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
CSNK1E-208ENST00000431611 RALGAPA2Q2PPJ7 1873 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 ITGB1P05556 798 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 CLUL1Q15846 466 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 ODR4Q5SWX8 454 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 Q6ZUG5 572 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 ADHFE1Q8IWW8 467 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 KLHL23Q8NBE8 558 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 SPPL3Q8TCT6 385 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 BRF1Q92994 677 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 ZMYND12Q9H0C1 365 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 CDHR5Q9HBB8 845 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 NOC2LQ9Y3T9 749 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
CSNK1E-208ENST00000431611 C19orf67A6NJJ6 358 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 ADAMTS3O15072 1205 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 LINC01565O15544 149 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 ATP4AP20648 1035 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 DNAJB1P25685 340 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 GATMP50440 423 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 SETQ01105 290 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 ADAM15Q13444 863 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 POF1BQ8WVV4 589 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 JAKMIP1Q96N16 626 aaKnown RBP17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 RNF216Q9NWF9 866 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 TTC3P53804 2025 aa17.18■□□□□ 0.34
CSNK1E-208ENST00000431611 DENND3A2RUS2 1198 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 ZBTB42B2RXF5 422 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 GPR182O15218 404 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 PRPF3O43395 683 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 MBTPS2O43462 519 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 DCXO43602 365 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 MGEA5O60502 916 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 TBX10O75333 385 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 GNA11P29992 359 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 IRS1P35568 1242 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 SMAD2Q15796 467 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 PKN1Q16512 942 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 BLOC1S2Q6QNY1 142 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 SLC24A5Q71RS6 500 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 NLRC5Q86WI3 1866 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 TMEM40Q8WWA1 233 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 BBXQ8WY36 941 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 KCNB2Q92953 911 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 ADAM2Q99965 735 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 UPF3BQ9BZI7 483 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 MAFBQ9Y5Q3 323 aaPredicted RBP17.17■□□□□ 0.34
CSNK1E-208ENST00000431611 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 C22orf31O95567 290 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 PSAPP07602 524 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 NDUFV1P49821 464 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 CRYBB1P53674 252 aaPredicted RBP17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 SMAD4Q13485 552 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 KIZQ2M2Z5 673 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 PRR16Q569H4 304 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 SPOUT1Q5T280 376 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 METTL13Q8N6R0 699 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 PHKBQ93100 1093 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 PPP1R16BQ96T49 567 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 GABBR1Q9UBS5 961 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 PCDHA10Q9Y5I2 948 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
CSNK1E-208ENST00000431611 C9IYK1 514 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 CIITAP33076 1130 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 HSPA4P34932 840 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 ADGRD2Q7Z7M1 963 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 EFHBQ8N7U6 833 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 BICD2Q8TD16 824 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 OSMRQ99650 979 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 AAASQ9NRG9 546 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 SAMM50Q9Y512 469 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 PCDHB12Q9Y5F1 795 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 NID2Q14112 1375 aa17.15■□□□□ 0.34
CSNK1E-208ENST00000431611 TBKBP1A7MCY6 615 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms