RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ERCC5P28715 1186 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-206ENST00000431390 EHHADHQ08426 723 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 PSMD2Q13200 908 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 IQSEC1Q6DN90 963 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 C1orf186Q6ZWK4 172 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 LUZP1Q86V48 1076 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 GPR20Q99678 358 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 ZNF302Q9NR11 478 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 ARID2Q68CP9 1835 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 BACH1O14867 736 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 NKRFO15226 690 aaKnown RBP eCLIP20.25■□□□□ 0.83
HMGN1-206ENST00000431390 GH1P01241 217 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 IDEP14735 1019 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 PPP1R2P41236 205 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 RARRES1P49788 294 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 LAMC2Q13753 1193 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 GIT2Q14161 759 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 COBLL1Q53SF7 1204 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 FAM160B1Q5W0V3 765 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 OTUD6AQ7L8S5 288 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 DHX40Q8IX18 779 aaKnown RBP20.25■□□□□ 0.83
HMGN1-206ENST00000431390 AFAP1L1Q8TED9 768 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
HMGN1-206ENST00000431390 RUSC1Q9BVN2 902 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 PANK4Q9NVE7 773 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
HMGN1-206ENST00000431390 SMTNL1A8MU46 457 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 BECN2A8MW95 431 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 NOP56O00567 594 aaKnown RBP20.24■□□□□ 0.83
HMGN1-206ENST00000431390 IKBKBO14920 756 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 ZNF862O60290 1169 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 GUCY2CP25092 1073 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 ADCYAP1R1P41586 468 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 ARHGAP1Q07960 439 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 COASYQ13057 564 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 SPATA33Q96N06 139 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 REEP2Q9BRK0 252 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 ZHX1Q9UKY1 873 aaPredicted RBP20.24■□□□□ 0.83
HMGN1-206ENST00000431390 GDAQ9Y2T3 454 aa20.24■□□□□ 0.83
HMGN1-206ENST00000431390 NPHP3-ACAD11A0A0J9YXS1 232 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 LGR5O75473 907 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 STBD1O95210 358 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 TCF7P36402 384 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-206ENST00000431390 HSDL1Q3SXM5 330 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 DUSP28Q4G0W2 176 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 XKR3Q5GH77 459 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 AOPEPQ8N6M6 819 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 PXYLP1Q8TE99 480 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 COPS5Q92905 334 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 CCDC43Q96MW1 224 aaKnown RBP20.23■□□□□ 0.83
HMGN1-206ENST00000431390 DEFB118Q96PH6 123 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 TIPINQ9BVW5 301 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 ODF2LQ9ULJ1 636 aa20.23■□□□□ 0.83
HMGN1-206ENST00000431390 EMSYQ7Z589 1322 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 GOLGA6L19H0YKK7 550 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
HMGN1-206ENST00000431390 CD44P16070 742 aaKnown RBP20.22■□□□□ 0.83
HMGN1-206ENST00000431390 PRKCEQ02156 737 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 STIM1Q13586 685 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 CCL14Q16627 93 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 PADI6Q6TGC4 694 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 ANO5Q75V66 913 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
HMGN1-206ENST00000431390 ADSSL1Q8N142 457 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 PCYT2Q99447 389 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 MYH11P35749 1972 aa20.22■□□□□ 0.83
HMGN1-206ENST00000431390 EVI5O60447 810 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 TBCAO75347 108 aaKnown RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 GAP43P17677 238 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 PRCPP42785 496 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 STAT5BP51692 787 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 MYL5Q02045 173 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 STK4Q13043 487 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 CCDC144BQ3MJ40 725 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 XKR9Q5GH70 373 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 TMEM63BQ5T3F8 832 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 ENOX1Q8TC92 643 aaKnown RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 AZI2Q9H6S1 392 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 NRBP1Q9UHY1 535 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 COL4A3BPQ9Y5P4 624 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 OATP04181 439 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 SMPD1P17405 629 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 UTP14CQ5TAP6 766 aaKnown RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 PLPPR4Q7Z2D5 763 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 KIAA0895Q8NCT3 520 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 PPTC7Q8NI37 304 aa20.21■□□□□ 0.83
HMGN1-206ENST00000431390 PAK6Q9NQU5 681 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-206ENST00000431390 ATP4AP20648 1035 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 CYP2C19P33261 490 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 SLC26A2P50443 739 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 ZNF131P52739 623 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 TPM4P67936 248 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 TNFAIP2Q03169 654 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms