RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ZSWIM2Q8NEG5 633 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 A0A0G2JLL6 359 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 A0A0U1RQJ8 604 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 CETN3O15182 167 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ARIH2O95376 493 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 CETPP11597 493 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 TCF7P36402 384 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ARHGAP44Q17R89 818 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 PRRT2Q7Z6L0 340 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ATRIPQ8WXE1 791 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 MRFAP1L1Q96HT8 127 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 BAG1Q99933 345 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 AGPAT5Q9NUQ2 364 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 OGFRQ9NZT2 677 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 RNF225M0QZC1 329 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 CXCL11O14625 94 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 EYA4O95677 639 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 CYP27A1Q02318 531 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 FAM47CQ5HY64 1035 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 RRAGAQ7L523 313 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 PTPN18Q99952 460 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 HSD17B14Q9BPX1 270 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 MYH7BA7E2Y1 1941 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 PITPNM2Q9BZ72 1349 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 TMEM119Q4V9L6 283 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 LRRC27Q9C0I9 530 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 HNRNPDLO14979 420 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 ZNF862O60290 1169 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 AOC2O75106 756 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 SPAG1Q07617 926 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 SYT2Q8N9I0 419 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 ACRBPQ8NEB7 543 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 PSMB7Q99436 277 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 ZNF302Q9NR11 478 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 CIITAP33076 1130 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 VSTM4Q8IW00 320 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 LARSQ9P2J5 1176 aaKnown RBP12.41□□□□□ -0.42
SMPD4-205ENST00000431183 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
SMPD4-205ENST00000431183 ASTN1O14525 1302 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 CYP3A7-CYP3A51PA0A087WV96 503 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 LRRN2O75325 713 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 CYP3A7P24462 503 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 SSTR3P32745 418 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 PSMC5P62195 406 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 CCNA1P78396 465 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 DRP2Q13474 957 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 KCTD19Q17RG1 926 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 TTI2Q6NXR4 508 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 KMT5AQ9NQR1 393 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 UBIAD1Q9Y5Z9 338 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 SIPA1L1O43166 1804 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 DENND3A2RUS2 1198 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 INO80B-WBP1J3KQ70 363 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 TRPA1O75762 1119 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 PSAPP07602 524 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 RARRES1P49788 294 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 STAT5BP51692 787 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 GTF2A2P52657 109 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 CCL14Q16627 93 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 ANO5Q75V66 913 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 CHP1Q99653 195 aa12.4□□□□□ -0.42
SMPD4-205ENST00000431183 INO80BQ9C086 356 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 LUC7L2Q9Y383 392 aaKnown RBP12.4□□□□□ -0.42
SMPD4-205ENST00000431183 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 CLCN3P51790 818 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-205ENST00000431183 NT5DC1Q5TFE4 455 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 SYT10Q6XYQ8 523 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 ARMCX2Q7L311 632 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 IRF2BP1Q8IU81 584 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 REPS2Q8NFH8 660 aa12.39□□□□□ -0.43
SMPD4-205ENST00000431183 AFG1LQ8WV93 481 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms